Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 PTGES3P2-201ENST00000407942 482 ntBASIC1.85□□□□□ -2.11
CASQ1P31415 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.85□□□□□ -2.11
CASQ1P31415 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CASQ1P31415 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.85□□□□□ -2.11
CASQ1P31415 USP9YP24-201ENST00000434374 697 ntBASIC1.85□□□□□ -2.11
CASQ1P31415 MTCO3P45-201ENST00000443036 613 ntBASIC1.85□□□□□ -2.11
CASQ1P31415 AC020550.1-201ENST00000447385 163 ntBASIC1.85□□□□□ -2.11
CASQ1P31415 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.85□□□□□ -2.11
CASQ1P31415 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.85□□□□□ -2.11
CASQ1P31415 RNU6-581P-201ENST00000516214 105 ntBASIC1.85□□□□□ -2.11
CASQ1P31415 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.85□□□□□ -2.11
CASQ1P31415 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CASQ1P31415 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.85□□□□□ -2.11
CASQ1P31415 AL161798.1-201ENST00000604630 131 ntBASIC1.85□□□□□ -2.11
CASQ1P31415 AC087045.1-201ENST00000605856 382 ntBASIC1.85□□□□□ -2.11
CASQ1P31415 AC026741.1-201ENST00000605892 482 ntBASIC1.85□□□□□ -2.11
CASQ1P31415 AP000776.1-201ENST00000530032 1663 ntBASIC1.85□□□□□ -2.11
CASQ1P31415 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CASQ1P31415 AC104454.1-201ENST00000421341 1401 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 WWP1P1-201ENST00000466609 2769 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 AL356292.1-201ENST00000283110 373 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 MIR208A-201ENST00000362287 71 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 MIR29C-201ENST00000385231 88 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 AL591034.2-201ENST00000402839 359 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.84□□□□□ -2.11
CASQ1P31415 MTCO1P3-201ENST00000429327 192 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 GTF2IP3-201ENST00000433887 494 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.84□□□□□ -2.11
CASQ1P31415 AL831737.1-201ENST00000441288 271 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 RPL9P6-201ENST00000492764 598 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 AC106872.3-201ENST00000495104 446 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 AC117522.2-201ENST00000510049 657 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 FAM206BP-201ENST00000510179 541 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 RNU6-751P-201ENST00000516382 101 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.84□□□□□ -2.11
CASQ1P31415 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.84□□□□□ -2.11
CASQ1P31415 AL353997.4-201ENST00000586196 166 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 UBE2L4-201ENST00000587688 464 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 AC098826.3-201ENST00000603823 466 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 ELOCP5-201ENST00000604924 333 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 AC069304.2-201ENST00000605154 435 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 AC008759.3-201ENST00000613300 508 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.84□□□□□ -2.11
CASQ1P31415 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
CASQ1P31415 AC097460.3-201ENST00000623099 442 ntBASIC1.84□□□□□ -2.11
CASQ1P31415 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CASQ1P31415 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.83□□□□□ -2.12
CASQ1P31415 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CASQ1P31415 RNU6-707P-201ENST00000364647 95 ntBASIC1.83□□□□□ -2.12
CASQ1P31415 RNU6-1122P-201ENST00000384449 107 ntBASIC1.83□□□□□ -2.12
CASQ1P31415 AL021407.1-201ENST00000404531 386 ntBASIC1.83□□□□□ -2.12
CASQ1P31415 C1DP1-201ENST00000426049 402 ntBASIC1.83□□□□□ -2.12
CASQ1P31415 AL645568.3-201ENST00000433683 316 ntBASIC1.83□□□□□ -2.12
CASQ1P31415 COX7BP2-201ENST00000437976 242 ntBASIC1.83□□□□□ -2.12
CASQ1P31415 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.83□□□□□ -2.12
CASQ1P31415 AC006512.1-201ENST00000468816 291 ntBASIC1.83□□□□□ -2.12
CASQ1P31415 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.83□□□□□ -2.12
CASQ1P31415 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.83□□□□□ -2.12
CASQ1P31415 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.83□□□□□ -2.12
CASQ1P31415 SNORA48.9-201ENST00000516419 162 ntBASIC1.83□□□□□ -2.12
CASQ1P31415 SLC2A13P1-201ENST00000531560 322 ntBASIC1.83□□□□□ -2.12
CASQ1P31415 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.83□□□□□ -2.12
CASQ1P31415 HIGD1AP17-201ENST00000554576 276 ntBASIC1.83□□□□□ -2.12
CASQ1P31415 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.83□□□□□ -2.12
CASQ1P31415 AC016925.2-201ENST00000605108 242 ntBASIC1.83□□□□□ -2.12
CASQ1P31415 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.83□□□□□ -2.12
CASQ1P31415 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.83□□□□□ -2.12
CASQ1P31415 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CASQ1P31415 U1.36-201ENST00000620684 176 ntBASIC1.83□□□□□ -2.12
CASQ1P31415 AC138627.2-201ENST00000624202 601 ntBASIC1.83□□□□□ -2.12
CASQ1P31415 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.83□□□□□ -2.12
CASQ1P31415 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
CASQ1P31415 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CASQ1P31415 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.82□□□□□ -2.12
CASQ1P31415 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CASQ1P31415 RNU6-343P-201ENST00000364709 104 ntBASIC1.82□□□□□ -2.12
CASQ1P31415 RPL23AP39-201ENST00000415533 405 ntBASIC1.82□□□□□ -2.12
CASQ1P31415 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.82□□□□□ -2.12
CASQ1P31415 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.82□□□□□ -2.12
CASQ1P31415 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.82□□□□□ -2.12
CASQ1P31415 AC003989.2-201ENST00000440224 169 ntBASIC1.82□□□□□ -2.12
CASQ1P31415 FABP5P15-201ENST00000453566 214 ntBASIC1.82□□□□□ -2.12
CASQ1P31415 AC011005.2-201ENST00000487324 359 ntBASIC1.82□□□□□ -2.12
CASQ1P31415 RPS29P11-201ENST00000496507 171 ntBASIC1.82□□□□□ -2.12
CASQ1P31415 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.82□□□□□ -2.12
CASQ1P31415 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.82□□□□□ -2.12
CASQ1P31415 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.82□□□□□ -2.12
CASQ1P31415 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.82□□□□□ -2.12
CASQ1P31415 AL356432.3-201ENST00000568952 465 ntBASIC1.82□□□□□ -2.12
CASQ1P31415 MIR1273D-201ENST00000577266 86 ntBASIC1.82□□□□□ -2.12
CASQ1P31415 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.82□□□□□ -2.12
CASQ1P31415 AC021646.1-201ENST00000605469 484 ntBASIC1.82□□□□□ -2.12
CASQ1P31415 AL583856.2-201ENST00000606298 543 ntBASIC1.82□□□□□ -2.12
CASQ1P31415 AC068944.2-201ENST00000610373 403 ntBASIC1.82□□□□□ -2.12
CASQ1P31415 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.82□□□□□ -2.12
CASQ1P31415 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CASQ1P31415 RNU1-23P-201ENST00000363361 144 ntBASIC1.81□□□□□ -2.12
CASQ1P31415 USP9YP26-201ENST00000421008 661 ntBASIC1.81□□□□□ -2.12
CASQ1P31415 AL451062.2-201ENST00000427515 271 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms