Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 TRBVA-201ENST00000498804 316 ntBASIC3.49□□□□□ -1.85
EPHA3P29320 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.49□□□□□ -1.85
EPHA3P29320 HMGB3P15-201ENST00000507326 574 ntBASIC3.49□□□□□ -1.85
EPHA3P29320 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.49□□□□□ -1.85
EPHA3P29320 Y_RNA.682-201ENST00000516457 100 ntBASIC3.49□□□□□ -1.85
EPHA3P29320 Y_RNA.691-201ENST00000516611 103 ntBASIC3.49□□□□□ -1.85
EPHA3P29320 RNU6-256P-201ENST00000516747 97 ntBASIC3.49□□□□□ -1.85
EPHA3P29320 IGKV2D-19-201ENST00000523346 262 ntBASIC3.49□□□□□ -1.85
EPHA3P29320 AP000889.2-201ENST00000532684 490 ntBASIC3.49□□□□□ -1.85
EPHA3P29320 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.49□□□□□ -1.85
EPHA3P29320 TRAV28-201ENST00000557548 323 ntBASIC3.49□□□□□ -1.85
EPHA3P29320 MIR1273C-201ENST00000578669 77 ntBASIC3.49□□□□□ -1.85
EPHA3P29320 MIR3672-201ENST00000584290 82 ntBASIC3.49□□□□□ -1.85
EPHA3P29320 AC007687.1-201ENST00000602704 304 ntBASIC3.49□□□□□ -1.85
EPHA3P29320 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
EPHA3P29320 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.49□□□□□ -1.85
EPHA3P29320 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
EPHA3P29320 AC092628.2-201ENST00000622492 339 ntBASIC3.49□□□□□ -1.85
EPHA3P29320 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
EPHA3P29320 PWAR6-201ENST00000552334 4618 ntBASIC3.49□□□□□ -1.85
EPHA3P29320 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
EPHA3P29320 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
EPHA3P29320 AC006026.1-201ENST00000444025 1803 ntBASIC3.49□□□□□ -1.85
EPHA3P29320 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.49□□□□□ -1.85
EPHA3P29320 MFSD8-236ENST00000641509 4050 ntBASIC3.49□□□□□ -1.85
EPHA3P29320 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
EPHA3P29320 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.48□□□□□ -1.85
EPHA3P29320 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.48□□□□□ -1.85
EPHA3P29320 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.48□□□□□ -1.85
EPHA3P29320 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
EPHA3P29320 SNORA75B-201ENST00000384053 137 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 RNU6-1179P-201ENST00000384667 107 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
EPHA3P29320 MIR450B-201ENST00000401182 78 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 U3.39-201ENST00000408569 239 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 RNA5SP317-201ENST00000410176 116 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 RNA5SP311-201ENST00000411290 116 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 RPS3AP46-201ENST00000448352 682 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 NUTF2P7-201ENST00000453086 375 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 FTH1P2-201ENST00000466086 412 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 RPS4XP13-201ENST00000483219 789 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.48□□□□□ -1.85
EPHA3P29320 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.48□□□□□ -1.85
EPHA3P29320 RNA5SP315-201ENST00000516340 116 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 RNA5SP309-201ENST00000516670 106 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 RNU6-579P-201ENST00000516879 102 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 RNA5SP312-201ENST00000517068 116 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.48□□□□□ -1.85
EPHA3P29320 AP003122.3-201ENST00000526316 255 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 AC084851.1-201ENST00000529105 249 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.48□□□□□ -1.85
EPHA3P29320 AC026333.2-201ENST00000542164 106 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 AC007224.1-201ENST00000564410 144 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.48□□□□□ -1.85
EPHA3P29320 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.48□□□□□ -1.85
EPHA3P29320 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.48□□□□□ -1.85
EPHA3P29320 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.48□□□□□ -1.85
EPHA3P29320 MIR3941-201ENST00000582572 103 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 MIR5692C1-201ENST00000585309 91 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 AL606490.9-201ENST00000603331 271 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 AL670379.10-201ENST00000604330 253 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 AL670379.9-201ENST00000605428 253 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 AC002044.1-201ENST00000606707 158 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 AL022345.1-201ENST00000607292 135 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.48□□□□□ -1.85
EPHA3P29320 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.48□□□□□ -1.85
EPHA3P29320 AC068724.3-201ENST00000625906 87 ntBASIC3.48□□□□□ -1.85
EPHA3P29320 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.48□□□□□ -1.85
EPHA3P29320 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.48□□□□□ -1.85
EPHA3P29320 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.48□□□□□ -1.85
EPHA3P29320 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.48□□□□□ -1.85
EPHA3P29320 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
EPHA3P29320 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
EPHA3P29320 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
EPHA3P29320 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
EPHA3P29320 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
EPHA3P29320 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
EPHA3P29320 AC058791.1-201ENST00000608412 3198 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
EPHA3P29320 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
EPHA3P29320 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.47□□□□□ -1.85
EPHA3P29320 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
EPHA3P29320 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
EPHA3P29320 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
EPHA3P29320 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.47□□□□□ -1.85
EPHA3P29320 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
EPHA3P29320 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
EPHA3P29320 Y_RNA.33-201ENST00000362591 102 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 RNU4-79P-201ENST00000362764 141 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 Y_RNA.67-201ENST00000362870 100 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.47□□□□□ -1.85
EPHA3P29320 Y_RNA.474-201ENST00000384341 102 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 HSPE1P26-201ENST00000405341 275 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 RNU6-1025P-201ENST00000410629 104 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.47□□□□□ -1.85
EPHA3P29320 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.47□□□□□ -1.85
EPHA3P29320 VN1R36P-201ENST00000414936 291 ntBASIC3.47□□□□□ -1.85
EPHA3P29320 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.47□□□□□ -1.85
EPHA3P29320 RPL17P36-201ENST00000420302 549 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms