Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC010889.1-201ENST00000566193 2666 ntBASIC3.12□□□□□ -1.91
CHMP24386 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHMP24386 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHMP24386 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.11□□□□□ -1.91
CHMP24386 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.11□□□□□ -1.91
CHMP24386 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHMP24386 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.11□□□□□ -1.91
CHMP24386 OR5H15-201ENST00000383696 930 ntBASIC3.11□□□□□ -1.91
CHMP24386 RNU6-116P-201ENST00000384042 109 ntBASIC3.11□□□□□ -1.91
CHMP24386 Y_RNA.582-201ENST00000391023 95 ntBASIC3.11□□□□□ -1.91
CHMP24386 GSTA9P-201ENST00000406231 611 ntBASIC3.11□□□□□ -1.91
CHMP24386 OR51A5P-201ENST00000415429 942 ntBASIC3.11□□□□□ -1.91
CHMP24386 AL513477.1-202ENST00000417061 214 ntBASIC3.11□□□□□ -1.91
CHMP24386 CALM2P2-201ENST00000428512 440 ntBASIC3.11□□□□□ -1.91
CHMP24386 AC073464.1-201ENST00000429823 534 ntBASIC3.11□□□□□ -1.91
CHMP24386 USP9YP14-201ENST00000430663 563 ntBASIC3.11□□□□□ -1.91
CHMP24386 AL162395.1-201ENST00000457882 422 ntBASIC3.11□□□□□ -1.91
CHMP24386 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHMP24386 RNA5SP385-201ENST00000515947 110 ntBASIC3.11□□□□□ -1.91
CHMP24386 SNORA31.26-201ENST00000517250 137 ntBASIC3.11□□□□□ -1.91
CHMP24386 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.11□□□□□ -1.91
CHMP24386 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.11□□□□□ -1.91
CHMP24386 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.11□□□□□ -1.91
CHMP24386 AL022154.1-201ENST00000604698 785 ntBASIC3.11□□□□□ -1.91
CHMP24386 AC008536.2-201ENST00000607284 349 ntBASIC3.11□□□□□ -1.91
CHMP24386 AC103591.3-201ENST00000608684 209 ntBASIC3.11□□□□□ -1.91
CHMP24386 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CHMP24386 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHMP24386 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.11□□□□□ -1.91
CHMP24386 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
CHMP24386 AC073346.2-201ENST00000624724 2058 ntBASIC3.1□□□□□ -1.91
CHMP24386 MIR208A-201ENST00000362287 71 ntBASIC3.1□□□□□ -1.91
CHMP24386 RNA5SP267-201ENST00000364893 126 ntBASIC3.1□□□□□ -1.91
CHMP24386 RNU4-48P-201ENST00000365559 182 ntBASIC3.1□□□□□ -1.91
CHMP24386 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CHMP24386 SNORA75B-201ENST00000384053 137 ntBASIC3.1□□□□□ -1.91
CHMP24386 MIR490-201ENST00000384865 128 ntBASIC3.1□□□□□ -1.91
CHMP24386 SNORA40C-201ENST00000391285 128 ntBASIC3.1□□□□□ -1.91
CHMP24386 RN7SKP220-201ENST00000410611 288 ntBASIC3.1□□□□□ -1.91
CHMP24386 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.1□□□□□ -1.91
CHMP24386 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.1□□□□□ -1.91
CHMP24386 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.1□□□□□ -1.91
CHMP24386 AL451074.3-201ENST00000437709 472 ntBASIC3.1□□□□□ -1.91
CHMP24386 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.1□□□□□ -1.91
CHMP24386 AC104058.1-201ENST00000448028 297 ntBASIC3.1□□□□□ -1.91
CHMP24386 AC003071.1-201ENST00000451219 789 ntBASIC3.1□□□□□ -1.91
CHMP24386 AL583843.1-201ENST00000456070 346 ntBASIC3.1□□□□□ -1.91
CHMP24386 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.1□□□□□ -1.91
CHMP24386 RN7SL807P-201ENST00000470923 297 ntBASIC3.1□□□□□ -1.91
CHMP24386 AC022493.1-201ENST00000492984 337 ntBASIC3.1□□□□□ -1.91
CHMP24386 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.1□□□□□ -1.91
CHMP24386 SEM1P1-201ENST00000506694 209 ntBASIC3.1□□□□□ -1.91
CHMP24386 MTCO3P7-201ENST00000510008 774 ntBASIC3.1□□□□□ -1.91
CHMP24386 RNU6-685P-201ENST00000517088 95 ntBASIC3.1□□□□□ -1.91
CHMP24386 IGKV2-26-201ENST00000518305 343 ntBASIC3.1□□□□□ -1.91
CHMP24386 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.1□□□□□ -1.91
CHMP24386 PSMA2P1-201ENST00000526365 646 ntBASIC3.1□□□□□ -1.91
CHMP24386 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.1□□□□□ -1.91
CHMP24386 AC009063.1-201ENST00000563342 702 ntBASIC3.1□□□□□ -1.91
CHMP24386 CYCSP39-201ENST00000565821 309 ntBASIC3.1□□□□□ -1.91
CHMP24386 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.1□□□□□ -1.91
CHMP24386 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.1□□□□□ -1.91
CHMP24386 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.1□□□□□ -1.91
CHMP24386 AC005261.5-201ENST00000596280 355 ntBASIC3.1□□□□□ -1.91
CHMP24386 AC025449.1-201ENST00000603896 529 ntBASIC3.1□□□□□ -1.91
CHMP24386 AC096577.2-201ENST00000611455 153 ntBASIC3.1□□□□□ -1.91
CHMP24386 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.1□□□□□ -1.91
CHMP24386 AC011155.2-201ENST00000623202 216 ntBASIC3.1□□□□□ -1.91
CHMP24386 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.1□□□□□ -1.91
CHMP24386 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.1□□□□□ -1.91
CHMP24386 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CHMP24386 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CHMP24386 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.1□□□□□ -1.91
CHMP24386 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.09□□□□□ -1.91
CHMP24386 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP24386 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP24386 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP24386 RNU4-24P-201ENST00000364565 139 ntBASIC3.09□□□□□ -1.91
CHMP24386 RNU6-898P-201ENST00000365627 104 ntBASIC3.09□□□□□ -1.91
CHMP24386 Z98749.2-208ENST00000381646 500 ntBASIC3.09□□□□□ -1.91
CHMP24386 Y_RNA.436-201ENST00000384097 102 ntBASIC3.09□□□□□ -1.91
CHMP24386 RNU6-166P-201ENST00000384371 107 ntBASIC3.09□□□□□ -1.91
CHMP24386 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CHMP24386 SNORA11.1-201ENST00000408133 129 ntBASIC3.09□□□□□ -1.91
CHMP24386 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.09□□□□□ -1.91
CHMP24386 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.09□□□□□ -1.91
CHMP24386 OR6C66P-201ENST00000414917 930 ntBASIC3.09□□□□□ -1.91
CHMP24386 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP24386 MTATP6P18-201ENST00000417994 673 ntBASIC3.09□□□□□ -1.91
CHMP24386 MYL8P-204ENST00000431574 518 ntBASIC3.09□□□□□ -1.91
CHMP24386 AL161651.1-201ENST00000440882 223 ntBASIC3.09□□□□□ -1.91
CHMP24386 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP24386 AC092001.1-201ENST00000453012 261 ntBASIC3.09□□□□□ -1.91
CHMP24386 BTF3P15-201ENST00000455606 336 ntBASIC3.09□□□□□ -1.91
CHMP24386 TRBV1-201ENST00000476502 284 ntBASIC3.09□□□□□ -1.91
CHMP24386 RN7SL283P-201ENST00000489055 303 ntBASIC3.09□□□□□ -1.91
CHMP24386 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.09□□□□□ -1.91
CHMP24386 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CHMP24386 AC112206.3-201ENST00000514578 389 ntBASIC3.09□□□□□ -1.91
CHMP24386 RNU6-581P-201ENST00000516214 105 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms