Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 Y_RNA.689-201ENST00000516589 107 ntBASIC3.12□□□□□ -1.91
BDNFP23560 RNU1-104P-201ENST00000517280 175 ntBASIC3.12□□□□□ -1.91
BDNFP23560 AC106038.2-201ENST00000520706 568 ntBASIC3.12□□□□□ -1.91
BDNFP23560 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.12□□□□□ -1.91
BDNFP23560 ADI1P3-201ENST00000549509 470 ntBASIC3.12□□□□□ -1.91
BDNFP23560 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.12□□□□□ -1.91
BDNFP23560 CYCSP39-201ENST00000565821 309 ntBASIC3.12□□□□□ -1.91
BDNFP23560 AC015871.2-201ENST00000603605 948 ntBASIC3.12□□□□□ -1.91
BDNFP23560 AL033523.1-201ENST00000605153 153 ntBASIC3.12□□□□□ -1.91
BDNFP23560 AC018638.7-201ENST00000605836 1114 ntBASIC3.12□□□□□ -1.91
BDNFP23560 AC244517.12-201ENST00000623581 663 ntBASIC3.12□□□□□ -1.91
BDNFP23560 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.12□□□□□ -1.91
BDNFP23560 FO624990.1-201ENST00000636373 85 ntBASIC3.12□□□□□ -1.91
BDNFP23560 ASNSP3-201ENST00000451989 1306 ntBASIC3.12□□□□□ -1.91
BDNFP23560 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
BDNFP23560 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.11□□□□□ -1.91
BDNFP23560 SNORA80A-201ENST00000363922 136 ntBASIC3.11□□□□□ -1.91
BDNFP23560 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.11□□□□□ -1.91
BDNFP23560 MIR524-201ENST00000385242 87 ntBASIC3.11□□□□□ -1.91
BDNFP23560 AL031577.2-201ENST00000404133 280 ntBASIC3.11□□□□□ -1.91
BDNFP23560 AC007064.1-201ENST00000412238 351 ntBASIC3.11□□□□□ -1.91
BDNFP23560 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.11□□□□□ -1.91
BDNFP23560 RPS3AP44-201ENST00000425466 790 ntBASIC3.11□□□□□ -1.91
BDNFP23560 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
BDNFP23560 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.11□□□□□ -1.91
BDNFP23560 AC012308.1-201ENST00000451232 178 ntBASIC3.11□□□□□ -1.91
BDNFP23560 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.11□□□□□ -1.91
BDNFP23560 AP001324.2-201ENST00000461163 319 ntBASIC3.11□□□□□ -1.91
BDNFP23560 RPL36AP48-201ENST00000485521 314 ntBASIC3.11□□□□□ -1.91
BDNFP23560 AC096576.1-201ENST00000489014 359 ntBASIC3.11□□□□□ -1.91
BDNFP23560 AC018437.1-201ENST00000492214 406 ntBASIC3.11□□□□□ -1.91
BDNFP23560 AC097462.2-201ENST00000504623 481 ntBASIC3.11□□□□□ -1.91
BDNFP23560 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.11□□□□□ -1.91
BDNFP23560 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.11□□□□□ -1.91
BDNFP23560 ACA59.2-201ENST00000517061 156 ntBASIC3.11□□□□□ -1.91
BDNFP23560 AC245166.1-201ENST00000521012 253 ntBASIC3.11□□□□□ -1.91
BDNFP23560 FAM92A1P1-201ENST00000528023 890 ntBASIC3.11□□□□□ -1.91
BDNFP23560 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.11□□□□□ -1.91
BDNFP23560 AC234778.2-201ENST00000566241 354 ntBASIC3.11□□□□□ -1.91
BDNFP23560 MIR3682-201ENST00000581338 84 ntBASIC3.11□□□□□ -1.91
BDNFP23560 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.11□□□□□ -1.91
BDNFP23560 NRBF2P1-201ENST00000587407 859 ntBASIC3.11□□□□□ -1.91
BDNFP23560 MIR15A-201ENST00000607334 83 ntBASIC3.11□□□□□ -1.91
BDNFP23560 AC096772.1-201ENST00000609146 564 ntBASIC3.11□□□□□ -1.91
BDNFP23560 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
BDNFP23560 AC025048.6-202ENST00000627667 438 ntBASIC3.11□□□□□ -1.91
BDNFP23560 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
BDNFP23560 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
BDNFP23560 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.1□□□□□ -1.91
BDNFP23560 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BDNFP23560 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
BDNFP23560 RNU2-63P-201ENST00000410792 194 ntBASIC3.1□□□□□ -1.91
BDNFP23560 OR51A5P-201ENST00000415429 942 ntBASIC3.1□□□□□ -1.91
BDNFP23560 AC245054.2-201ENST00000415639 319 ntBASIC3.1□□□□□ -1.91
BDNFP23560 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.1□□□□□ -1.91
BDNFP23560 AL356583.2-201ENST00000426536 280 ntBASIC3.1□□□□□ -1.91
BDNFP23560 MED13P1-201ENST00000428342 171 ntBASIC3.1□□□□□ -1.91
BDNFP23560 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.1□□□□□ -1.91
BDNFP23560 AC107083.1-201ENST00000439643 279 ntBASIC3.1□□□□□ -1.91
BDNFP23560 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.1□□□□□ -1.91
BDNFP23560 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.1□□□□□ -1.91
BDNFP23560 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.1□□□□□ -1.91
BDNFP23560 AC083906.5-201ENST00000503722 328 ntBASIC3.1□□□□□ -1.91
BDNFP23560 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.1□□□□□ -1.91
BDNFP23560 AC117522.1-201ENST00000509821 380 ntBASIC3.1□□□□□ -1.91
BDNFP23560 OR5AQ1P-201ENST00000527596 927 ntBASIC3.1□□□□□ -1.91
BDNFP23560 AP003122.4-201ENST00000530980 758 ntBASIC3.1□□□□□ -1.91
BDNFP23560 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.1□□□□□ -1.91
BDNFP23560 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.1□□□□□ -1.91
BDNFP23560 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
BDNFP23560 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.1□□□□□ -1.91
BDNFP23560 MIR5194-201ENST00000582634 120 ntBASIC3.1□□□□□ -1.91
BDNFP23560 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.1□□□□□ -1.91
BDNFP23560 AL645944.1-201ENST00000603857 493 ntBASIC3.1□□□□□ -1.91
BDNFP23560 AC087045.1-201ENST00000605856 382 ntBASIC3.1□□□□□ -1.91
BDNFP23560 AL139286.2-201ENST00000606838 396 ntBASIC3.1□□□□□ -1.91
BDNFP23560 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
BDNFP23560 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.1□□□□□ -1.91
BDNFP23560 U6.42-201ENST00000618440 107 ntBASIC3.1□□□□□ -1.91
BDNFP23560 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.1□□□□□ -1.91
BDNFP23560 AF246928.1-201ENST00000623768 87 ntBASIC3.1□□□□□ -1.91
BDNFP23560 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.1□□□□□ -1.91
BDNFP23560 MTND4P4-201ENST00000439033 1366 ntBASIC3.1□□□□□ -1.91
BDNFP23560 Z82209.1-201ENST00000422141 2135 ntBASIC3.1□□□□□ -1.91
BDNFP23560 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
BDNFP23560 SNORA4.3-201ENST00000365564 137 ntBASIC3.09□□□□□ -1.91
BDNFP23560 Y_RNA.560-201ENST00000384689 102 ntBASIC3.09□□□□□ -1.91
BDNFP23560 SNORA46-201ENST00000384762 135 ntBASIC3.09□□□□□ -1.91
BDNFP23560 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
BDNFP23560 RPL21P3-201ENST00000395517 478 ntBASIC3.09□□□□□ -1.91
BDNFP23560 AL353621.1-201ENST00000418219 243 ntBASIC3.09□□□□□ -1.91
BDNFP23560 AL365203.2-201ENST00000423444 196 ntBASIC3.09□□□□□ -1.91
BDNFP23560 AL589872.1-201ENST00000426602 288 ntBASIC3.09□□□□□ -1.91
BDNFP23560 AC093106.2-201ENST00000428212 385 ntBASIC3.09□□□□□ -1.91
BDNFP23560 RPL30P4-201ENST00000429309 333 ntBASIC3.09□□□□□ -1.91
BDNFP23560 AC236972.1-201ENST00000433225 199 ntBASIC3.09□□□□□ -1.91
BDNFP23560 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.09□□□□□ -1.91
BDNFP23560 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.09□□□□□ -1.91
BDNFP23560 AL139109.1-201ENST00000455491 297 ntBASIC3.09□□□□□ -1.91
BDNFP23560 RN7SL75P-201ENST00000461926 281 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms