Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 RNA5SP356-201ENST00000515972 94 ntBASIC3.38□□□□□ -1.87
MMP3P08254 RNU6-1178P-201ENST00000516674 107 ntBASIC3.38□□□□□ -1.87
MMP3P08254 RNU6-1231P-201ENST00000517185 103 ntBASIC3.38□□□□□ -1.87
MMP3P08254 FO082796.1-201ENST00000523795 183 ntBASIC3.38□□□□□ -1.87
MMP3P08254 AP006587.4-201ENST00000526053 529 ntBASIC3.38□□□□□ -1.87
MMP3P08254 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.38□□□□□ -1.87
MMP3P08254 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.38□□□□□ -1.87
MMP3P08254 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MMP3P08254 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MMP3P08254 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.38□□□□□ -1.87
MMP3P08254 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.38□□□□□ -1.87
MMP3P08254 RMST_3.1-201ENST00000611651 109 ntBASIC3.38□□□□□ -1.87
MMP3P08254 AL355073.2-201ENST00000612106 557 ntBASIC3.38□□□□□ -1.87
MMP3P08254 AC024940.5-201ENST00000622889 474 ntBASIC3.38□□□□□ -1.87
MMP3P08254 AC025034.2-201ENST00000623264 286 ntBASIC3.38□□□□□ -1.87
MMP3P08254 AC005609.4-201ENST00000625071 447 ntBASIC3.38□□□□□ -1.87
MMP3P08254 AC073476.4-201ENST00000628409 72 ntBASIC3.38□□□□□ -1.87
MMP3P08254 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.38□□□□□ -1.87
MMP3P08254 AC006020.1-201ENST00000420179 1854 ntBASIC3.38□□□□□ -1.87
MMP3P08254 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MMP3P08254 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
MMP3P08254 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MMP3P08254 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
MMP3P08254 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MMP3P08254 AL021368.2-201ENST00000606125 5352 ntBASIC3.37□□□□□ -1.87
MMP3P08254 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MMP3P08254 RNU6-451P-201ENST00000362921 107 ntBASIC3.37□□□□□ -1.87
MMP3P08254 RNU6-179P-201ENST00000363350 107 ntBASIC3.37□□□□□ -1.87
MMP3P08254 RNU6-996P-201ENST00000365438 107 ntBASIC3.37□□□□□ -1.87
MMP3P08254 RNU6-1029P-201ENST00000384109 107 ntBASIC3.37□□□□□ -1.87
MMP3P08254 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MMP3P08254 OR9R1P-201ENST00000412200 877 ntBASIC3.37□□□□□ -1.87
MMP3P08254 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.37□□□□□ -1.87
MMP3P08254 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.37□□□□□ -1.87
MMP3P08254 FABP5P13-201ENST00000452144 328 ntBASIC3.37□□□□□ -1.87
MMP3P08254 HMGN1P18-201ENST00000457642 277 ntBASIC3.37□□□□□ -1.87
MMP3P08254 RPL31P58-201ENST00000469001 379 ntBASIC3.37□□□□□ -1.87
MMP3P08254 RPS4XP13-201ENST00000483219 789 ntBASIC3.37□□□□□ -1.87
MMP3P08254 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.37□□□□□ -1.87
MMP3P08254 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.37□□□□□ -1.87
MMP3P08254 RBBP4P6-201ENST00000508098 202 ntBASIC3.37□□□□□ -1.87
MMP3P08254 MIR4775-201ENST00000581168 75 ntBASIC3.37□□□□□ -1.87
MMP3P08254 AL035413.2-201ENST00000604801 525 ntBASIC3.37□□□□□ -1.87
MMP3P08254 AL355810.1-201ENST00000614629 552 ntBASIC3.37□□□□□ -1.87
MMP3P08254 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.37□□□□□ -1.87
MMP3P08254 FRG1KP-201ENST00000623592 341 ntBASIC3.37□□□□□ -1.87
MMP3P08254 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
MMP3P08254 AC024614.3-201ENST00000637860 256 ntBASIC3.37□□□□□ -1.87
MMP3P08254 AC005183.1-201ENST00000603687 1979 ntBASIC3.37□□□□□ -1.87
MMP3P08254 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.37□□□□□ -1.87
MMP3P08254 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.36□□□□□ -1.87
MMP3P08254 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.36□□□□□ -1.87
MMP3P08254 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MMP3P08254 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MMP3P08254 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.36□□□□□ -1.87
MMP3P08254 RNU6-288P-201ENST00000363690 104 ntBASIC3.36□□□□□ -1.87
MMP3P08254 RNY3P3-201ENST00000363816 102 ntBASIC3.36□□□□□ -1.87
MMP3P08254 RNU6-960P-201ENST00000364056 120 ntBASIC3.36□□□□□ -1.87
MMP3P08254 RNU6-61P-201ENST00000365528 109 ntBASIC3.36□□□□□ -1.87
MMP3P08254 RNU6-606P-201ENST00000384721 111 ntBASIC3.36□□□□□ -1.87
MMP3P08254 Y_RNA.576-201ENST00000384781 102 ntBASIC3.36□□□□□ -1.87
MMP3P08254 MIR607-201ENST00000385241 96 ntBASIC3.36□□□□□ -1.87
MMP3P08254 RNU6-876P-201ENST00000391295 104 ntBASIC3.36□□□□□ -1.87
MMP3P08254 RN7SKP140-201ENST00000411196 284 ntBASIC3.36□□□□□ -1.87
MMP3P08254 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MMP3P08254 RPL7L1P10-201ENST00000427790 463 ntBASIC3.36□□□□□ -1.87
MMP3P08254 NEFMP1-201ENST00000443423 1006 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AC020550.1-201ENST00000447385 163 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AC073415.1-201ENST00000449240 153 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AL118520.1-201ENST00000450770 291 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.36□□□□□ -1.87
MMP3P08254 AL356010.1-201ENST00000456364 102 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.36□□□□□ -1.87
MMP3P08254 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.36□□□□□ -1.87
MMP3P08254 AL355836.1-201ENST00000555951 870 ntBASIC3.36□□□□□ -1.87
MMP3P08254 GTF3AP2-201ENST00000557014 266 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.36□□□□□ -1.87
MMP3P08254 AC012182.1-201ENST00000570133 895 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AC010653.1-201ENST00000571108 881 ntBASIC3.36□□□□□ -1.87
MMP3P08254 BNIP3P30-201ENST00000601184 574 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AL670379.6-201ENST00000603753 252 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AL670379.11-201ENST00000604059 253 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AC008162.1-201ENST00000604718 254 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AL670379.1-201ENST00000604752 252 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AC106900.2-201ENST00000604994 317 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AL670379.5-201ENST00000605253 252 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AL670379.12-201ENST00000605291 253 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AL670379.8-201ENST00000605353 252 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AL670379.7-201ENST00000605823 252 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.36□□□□□ -1.87
MMP3P08254 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MMP3P08254 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MMP3P08254 CASC19-280ENST00000642102 1351 ntBASIC3.36□□□□□ -1.87
MMP3P08254 CKAP2P1-201ENST00000555477 2049 ntBASIC3.36□□□□□ -1.87
MMP3P08254 AL354685.2-201ENST00000448218 1447 ntBASIC3.36□□□□□ -1.87
MMP3P08254 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
MMP3P08254 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
MMP3P08254 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MMP3P08254 NACAP2-201ENST00000318548 624 ntBASIC3.35□□□□□ -1.87
MMP3P08254 RPL7P26-201ENST00000333817 754 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms