Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RNU6-250P-201ENST00000516958 103 ntBASIC1.28□□□□□ -2.2
CTSDP07339 RNU6-714P-201ENST00000516963 103 ntBASIC1.28□□□□□ -2.2
CTSDP07339 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.28□□□□□ -2.2
CTSDP07339 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.28□□□□□ -2.2
CTSDP07339 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.28□□□□□ -2.2
CTSDP07339 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CTSDP07339 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.28□□□□□ -2.2
CTSDP07339 AL354943.1-201ENST00000572103 781 ntBASIC1.28□□□□□ -2.2
CTSDP07339 MIR4255-201ENST00000579351 72 ntBASIC1.28□□□□□ -2.2
CTSDP07339 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.28□□□□□ -2.2
CTSDP07339 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.28□□□□□ -2.2
CTSDP07339 AC005261.5-201ENST00000596280 355 ntBASIC1.28□□□□□ -2.2
CTSDP07339 AL138963.2-201ENST00000605137 226 ntBASIC1.28□□□□□ -2.2
CTSDP07339 AL139344.1-201ENST00000605228 195 ntBASIC1.28□□□□□ -2.2
CTSDP07339 AC004805.2-201ENST00000605382 482 ntBASIC1.28□□□□□ -2.2
CTSDP07339 AC243773.3-201ENST00000613270 256 ntBASIC1.28□□□□□ -2.2
CTSDP07339 AC007490.1-201ENST00000624321 703 ntBASIC1.28□□□□□ -2.2
CTSDP07339 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CTSDP07339 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CTSDP07339 RNU5B-1-201ENST00000363286 116 ntBASIC1.27□□□□□ -2.21
CTSDP07339 RNU1-42P-201ENST00000364033 160 ntBASIC1.27□□□□□ -2.21
CTSDP07339 RNU6-707P-201ENST00000364647 95 ntBASIC1.27□□□□□ -2.21
CTSDP07339 RNU6-354P-201ENST00000383862 107 ntBASIC1.27□□□□□ -2.21
CTSDP07339 RNU6-610P-201ENST00000384264 107 ntBASIC1.27□□□□□ -2.21
CTSDP07339 CISD1P1-201ENST00000393907 327 ntBASIC1.27□□□□□ -2.21
CTSDP07339 AL627390.1-201ENST00000396055 340 ntBASIC1.27□□□□□ -2.21
CTSDP07339 TXNP7-201ENST00000406296 293 ntBASIC1.27□□□□□ -2.21
CTSDP07339 MIR1304-201ENST00000408243 91 ntBASIC1.27□□□□□ -2.21
CTSDP07339 RNU2-63P-201ENST00000410792 194 ntBASIC1.27□□□□□ -2.21
CTSDP07339 EDDM3CP-201ENST00000415977 425 ntBASIC1.27□□□□□ -2.21
CTSDP07339 RPS24P7-201ENST00000416921 246 ntBASIC1.27□□□□□ -2.21
CTSDP07339 AC007435.1-201ENST00000421086 415 ntBASIC1.27□□□□□ -2.21
CTSDP07339 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.27□□□□□ -2.21
CTSDP07339 USP9YP22-201ENST00000438971 294 ntBASIC1.27□□□□□ -2.21
CTSDP07339 AC007677.1-201ENST00000445757 515 ntBASIC1.27□□□□□ -2.21
CTSDP07339 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.27□□□□□ -2.21
CTSDP07339 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.27□□□□□ -2.21
CTSDP07339 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.27□□□□□ -2.21
CTSDP07339 RNU1-98P-201ENST00000458992 160 ntBASIC1.27□□□□□ -2.21
CTSDP07339 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.27□□□□□ -2.21
CTSDP07339 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.27□□□□□ -2.21
CTSDP07339 FO393415.2-201ENST00000480085 343 ntBASIC1.27□□□□□ -2.21
CTSDP07339 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.27□□□□□ -2.21
CTSDP07339 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.27□□□□□ -2.21
CTSDP07339 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.27□□□□□ -2.21
CTSDP07339 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.27□□□□□ -2.21
CTSDP07339 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.27□□□□□ -2.21
CTSDP07339 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.27□□□□□ -2.21
CTSDP07339 EEF1A1P37-201ENST00000522748 715 ntBASIC1.27□□□□□ -2.21
CTSDP07339 MIR3126-201ENST00000577443 74 ntBASIC1.27□□□□□ -2.21
CTSDP07339 AC025811.1-201ENST00000604312 472 ntBASIC1.27□□□□□ -2.21
CTSDP07339 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.27□□□□□ -2.21
CTSDP07339 AL357080.1-201ENST00000617394 239 ntBASIC1.27□□□□□ -2.21
CTSDP07339 AC009268.2-201ENST00000621925 457 ntBASIC1.27□□□□□ -2.21
CTSDP07339 MTND4P23-201ENST00000447723 1363 ntBASIC1.26□□□□□ -2.21
CTSDP07339 RNU6-609P-201ENST00000365459 107 ntBASIC1.26□□□□□ -2.21
CTSDP07339 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.26□□□□□ -2.21
CTSDP07339 MIR504-201ENST00000385065 83 ntBASIC1.26□□□□□ -2.21
CTSDP07339 RNU6-754P-201ENST00000391166 107 ntBASIC1.26□□□□□ -2.21
CTSDP07339 AL033519.2-201ENST00000403958 392 ntBASIC1.26□□□□□ -2.21
CTSDP07339 TPMTP2-201ENST00000414372 726 ntBASIC1.26□□□□□ -2.21
CTSDP07339 VN1R36P-201ENST00000414936 291 ntBASIC1.26□□□□□ -2.21
CTSDP07339 AC074117.2-201ENST00000417130 397 ntBASIC1.26□□□□□ -2.21
CTSDP07339 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.26□□□□□ -2.21
CTSDP07339 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.26□□□□□ -2.21
CTSDP07339 ELOCP14-201ENST00000428070 331 ntBASIC1.26□□□□□ -2.21
CTSDP07339 MTCO1P3-201ENST00000429327 192 ntBASIC1.26□□□□□ -2.21
CTSDP07339 ELOCP7-201ENST00000439968 331 ntBASIC1.26□□□□□ -2.21
CTSDP07339 MTND2P20-201ENST00000440805 661 ntBASIC1.26□□□□□ -2.21
CTSDP07339 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.26□□□□□ -2.21
CTSDP07339 AL357134.1-201ENST00000445848 426 ntBASIC1.26□□□□□ -2.21
CTSDP07339 HMGN2P10-201ENST00000448085 265 ntBASIC1.26□□□□□ -2.21
CTSDP07339 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.26□□□□□ -2.21
CTSDP07339 AC013267.1-201ENST00000458227 267 ntBASIC1.26□□□□□ -2.21
CTSDP07339 AC008481.1-201ENST00000463278 396 ntBASIC1.26□□□□□ -2.21
CTSDP07339 RNU6-548P-201ENST00000517083 115 ntBASIC1.26□□□□□ -2.21
CTSDP07339 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.26□□□□□ -2.21
CTSDP07339 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.26□□□□□ -2.21
CTSDP07339 AC021739.1-201ENST00000559631 174 ntBASIC1.26□□□□□ -2.21
CTSDP07339 AC012435.1-202ENST00000568772 240 ntBASIC1.26□□□□□ -2.21
CTSDP07339 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.26□□□□□ -2.21
CTSDP07339 MIR4298-201ENST00000584380 73 ntBASIC1.26□□□□□ -2.21
CTSDP07339 AC091152.3-201ENST00000604227 325 ntBASIC1.26□□□□□ -2.21
CTSDP07339 AC069304.2-201ENST00000605154 435 ntBASIC1.26□□□□□ -2.21
CTSDP07339 BX248123.2-201ENST00000606318 124 ntBASIC1.26□□□□□ -2.21
CTSDP07339 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.26□□□□□ -2.21
CTSDP07339 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.26□□□□□ -2.21
CTSDP07339 AL445264.1-201ENST00000621719 171 ntBASIC1.26□□□□□ -2.21
CTSDP07339 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CTSDP07339 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.26□□□□□ -2.21
CTSDP07339 CDC27P3-201ENST00000635418 1910 ntBASIC1.26□□□□□ -2.21
CTSDP07339 AC006026.1-201ENST00000444025 1803 ntBASIC1.26□□□□□ -2.21
CTSDP07339 MTND5P10-201ENST00000603719 1809 ntBASIC1.26□□□□□ -2.21
CTSDP07339 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.26□□□□□ -2.21
CTSDP07339 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CTSDP07339 CDR1-202ENST00000625883 1485 ntBASIC1.25□□□□□ -2.21
CTSDP07339 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.25□□□□□ -2.21
CTSDP07339 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.25□□□□□ -2.21
CTSDP07339 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CTSDP07339 RNU6-97P-201ENST00000363387 104 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms