Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC096772.1-201ENST00000609146 564 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 AL356585.4-201ENST00000623078 1229 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 AC097655.1-201ENST00000635075 318 ntBASIC1.37□□□□□ -2.19
COL1A1P02452 MFSD8-213ENST00000641134 1327 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 AC008555.8-201ENST00000623602 2168 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 AC025263.3-201ENST00000622965 1396 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 RNU1-62P-201ENST00000362599 164 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
COL1A1P02452 SNORD51-201ENST00000384320 80 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
COL1A1P02452 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 AL356432.1-201ENST00000405809 419 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 AL133384.1-201ENST00000412744 351 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 AL590383.1-201ENST00000428602 75 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 ZNF965P-201ENST00000432501 817 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.36□□□□□ -2.19
COL1A1P02452 AL512844.2-201ENST00000433990 593 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 AL121601.2-201ENST00000438019 707 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.36□□□□□ -2.19
COL1A1P02452 AL500527.1-201ENST00000448532 255 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 DYNLL1P5-201ENST00000467158 270 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.36□□□□□ -2.19
COL1A1P02452 AC114786.4-201ENST00000508771 728 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 AC114797.1-201ENST00000514003 728 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.36□□□□□ -2.19
COL1A1P02452 ZNF705CP-201ENST00000530515 889 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.36□□□□□ -2.19
COL1A1P02452 AC087465.1-201ENST00000560574 245 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
COL1A1P02452 SUB1P4-201ENST00000566062 339 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 AC005034.5-201ENST00000604219 466 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 AC090617.9-201ENST00000623751 147 ntBASIC1.36□□□□□ -2.19
COL1A1P02452 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COL1A1P02452 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
COL1A1P02452 U8.3-201ENST00000363321 132 ntBASIC1.35□□□□□ -2.19
COL1A1P02452 RNU6-40P-201ENST00000384254 107 ntBASIC1.35□□□□□ -2.19
COL1A1P02452 PTGES3P2-201ENST00000407942 482 ntBASIC1.35□□□□□ -2.19
COL1A1P02452 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.35□□□□□ -2.19
COL1A1P02452 HMGB1P49-201ENST00000418882 569 ntBASIC1.35□□□□□ -2.19
COL1A1P02452 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.35□□□□□ -2.19
COL1A1P02452 DDX3P2-201ENST00000446138 111 ntBASIC1.35□□□□□ -2.19
COL1A1P02452 RPL23AP3-201ENST00000453844 468 ntBASIC1.35□□□□□ -2.19
COL1A1P02452 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.35□□□□□ -2.19
COL1A1P02452 MRPS17P3-201ENST00000465453 385 ntBASIC1.35□□□□□ -2.19
COL1A1P02452 RPL30P12-201ENST00000474666 353 ntBASIC1.35□□□□□ -2.19
COL1A1P02452 AC114801.2-201ENST00000503825 781 ntBASIC1.35□□□□□ -2.19
COL1A1P02452 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.35□□□□□ -2.19
COL1A1P02452 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.35□□□□□ -2.19
COL1A1P02452 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.35□□□□□ -2.19
COL1A1P02452 RNU6-113P-201ENST00000516653 101 ntBASIC1.35□□□□□ -2.19
COL1A1P02452 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.35□□□□□ -2.19
COL1A1P02452 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.35□□□□□ -2.19
COL1A1P02452 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.35□□□□□ -2.19
COL1A1P02452 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.35□□□□□ -2.19
COL1A1P02452 AC068057.2-201ENST00000624047 895 ntBASIC1.35□□□□□ -2.19
COL1A1P02452 MTCO1P18-201ENST00000455518 1419 ntBASIC1.35□□□□□ -2.19
COL1A1P02452 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
COL1A1P02452 EBAG9P1-201ENST00000418955 543 ntBASIC1.34□□□□□ -2.19
COL1A1P02452 AL109913.1-201ENST00000421173 514 ntBASIC1.34□□□□□ -2.19
COL1A1P02452 BEND7P1-201ENST00000422058 457 ntBASIC1.34□□□□□ -2.19
COL1A1P02452 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.34□□□□□ -2.19
COL1A1P02452 AP000949.1-201ENST00000438328 629 ntBASIC1.34□□□□□ -2.19
COL1A1P02452 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.34□□□□□ -2.19
COL1A1P02452 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.34□□□□□ -2.19
COL1A1P02452 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
COL1A1P02452 RN7SKP265-201ENST00000516448 223 ntBASIC1.34□□□□□ -2.19
COL1A1P02452 SCARNA3-201ENST00000517097 143 ntBASIC1.34□□□□□ -2.19
COL1A1P02452 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.34□□□□□ -2.19
COL1A1P02452 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.34□□□□□ -2.19
COL1A1P02452 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.34□□□□□ -2.19
COL1A1P02452 HSBP1P1-201ENST00000555205 166 ntBASIC1.34□□□□□ -2.19
COL1A1P02452 VN1R88P-201ENST00000596787 292 ntBASIC1.34□□□□□ -2.19
COL1A1P02452 AC007038.2-201ENST00000608095 740 ntBASIC1.34□□□□□ -2.19
COL1A1P02452 AC006213.4-201ENST00000616184 634 ntBASIC1.34□□□□□ -2.19
COL1A1P02452 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.33□□□□□ -2.2
COL1A1P02452 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
COL1A1P02452 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
COL1A1P02452 RNU1-148P-201ENST00000384472 162 ntBASIC1.33□□□□□ -2.2
COL1A1P02452 U8.14-201ENST00000390843 143 ntBASIC1.33□□□□□ -2.2
COL1A1P02452 UBE2V1P11-201ENST00000411559 285 ntBASIC1.33□□□□□ -2.2
COL1A1P02452 AC023141.4-201ENST00000412031 328 ntBASIC1.33□□□□□ -2.2
COL1A1P02452 SNORD56-201ENST00000413522 71 ntBASIC1.33□□□□□ -2.2
COL1A1P02452 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.33□□□□□ -2.2
COL1A1P02452 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.33□□□□□ -2.2
COL1A1P02452 AC092047.1-201ENST00000424997 240 ntBASIC1.33□□□□□ -2.2
COL1A1P02452 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.33□□□□□ -2.2
COL1A1P02452 AL049734.2-201ENST00000441066 616 ntBASIC1.33□□□□□ -2.2
COL1A1P02452 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.33□□□□□ -2.2
COL1A1P02452 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.33□□□□□ -2.2
COL1A1P02452 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.33□□□□□ -2.2
COL1A1P02452 AL133241.1-201ENST00000556832 487 ntBASIC1.33□□□□□ -2.2
COL1A1P02452 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.33□□□□□ -2.2
COL1A1P02452 MIR4295-201ENST00000585286 85 ntBASIC1.33□□□□□ -2.2
COL1A1P02452 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.33□□□□□ -2.2
COL1A1P02452 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.33□□□□□ -2.2
COL1A1P02452 AL355297.2-201ENST00000604792 129 ntBASIC1.33□□□□□ -2.2
COL1A1P02452 AC090132.2-201ENST00000615881 347 ntBASIC1.33□□□□□ -2.2
COL1A1P02452 AC073569.3-201ENST00000619055 682 ntBASIC1.33□□□□□ -2.2
COL1A1P02452 MIR7157-201ENST00000635801 60 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms