Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
TOP3BO95985 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
TOP3BO95985 AL353743.1-202ENST00000431724 1695 ntBASIC3.61□□□□□ -1.83
TOP3BO95985 AC010733.2-201ENST00000589496 5702 ntBASIC3.61□□□□□ -1.83
TOP3BO95985 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TOP3BO95985 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TOP3BO95985 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TOP3BO95985 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TOP3BO95985 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TOP3BO95985 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TOP3BO95985 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
TOP3BO95985 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
TOP3BO95985 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.61□□□□□ -1.83
TOP3BO95985 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.6□□□□□ -1.83
TOP3BO95985 AL139276.1-201ENST00000311910 1001 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 HSPE1P11-201ENST00000339579 310 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 MIR369-201ENST00000362155 70 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 SNORD9-201ENST00000362566 104 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 RNU6-1155P-201ENST00000363554 107 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 RNU6-522P-201ENST00000364497 107 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 RNA5SP126-201ENST00000365092 109 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 RNA5SP235-201ENST00000365411 114 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TOP3BO95985 MIR135A2-201ENST00000384854 100 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 MIR184-201ENST00000384962 84 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 MIR559-201ENST00000385188 96 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 RNU6-754P-201ENST00000391166 107 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TOP3BO95985 AL606923.1-201ENST00000406616 190 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 MTCO2P27-201ENST00000420740 428 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 RNU7-182P-201ENST00000459009 62 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 RNU7-170P-201ENST00000459303 61 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 AC130509.1-201ENST00000464158 433 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 AC126389.1-201ENST00000477436 290 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.6□□□□□ -1.83
TOP3BO95985 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TOP3BO95985 AC092436.1-201ENST00000506450 503 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 AC091885.1-201ENST00000506658 268 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.6□□□□□ -1.83
TOP3BO95985 RNU6-559P-201ENST00000516151 98 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 RNU2-27P-201ENST00000516185 142 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 SNORA70.18-201ENST00000516696 98 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.6□□□□□ -1.83
TOP3BO95985 DEFB108D-201ENST00000527787 222 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.6□□□□□ -1.83
TOP3BO95985 AC006270.2-201ENST00000578523 652 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 MIR4775-201ENST00000581168 75 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 XIAPP1-201ENST00000603162 600 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 AL121655.1-201ENST00000605811 308 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 AL355802.3-201ENST00000607571 545 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 AC012531.5-201ENST00000611375 151 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 AC093838.1-201ENST00000613014 469 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 AC008121.3-201ENST00000618726 433 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 MTND5P42-201ENST00000637720 498 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TOP3BO95985 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TOP3BO95985 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TOP3BO95985 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TOP3BO95985 AL353746.1-201ENST00000566293 6881 ntBASIC3.6□□□□□ -1.83
TOP3BO95985 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
TOP3BO95985 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
TOP3BO95985 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TOP3BO95985 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TOP3BO95985 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TOP3BO95985 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TOP3BO95985 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.59□□□□□ -1.83
TOP3BO95985 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
TOP3BO95985 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.59□□□□□ -1.83
TOP3BO95985 RNA5SP374-201ENST00000362939 125 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 RNU6-511P-201ENST00000363496 107 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 Y_RNA.216-201ENST00000364205 93 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 SNORD6-201ENST00000365444 73 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 Y_RNA.373-201ENST00000365600 103 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.59□□□□□ -1.83
TOP3BO95985 RNU6-1297P-201ENST00000384415 104 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 SNORD116-29-201ENST00000384516 83 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 RNU6-1160P-201ENST00000384546 104 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
TOP3BO95985 AC017079.2-201ENST00000416102 485 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 RPL7L1P10-201ENST00000427790 463 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 AL121871.1-201ENST00000443413 436 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.59□□□□□ -1.83
TOP3BO95985 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.59□□□□□ -1.83
TOP3BO95985 Y_RNA.631-201ENST00000459607 101 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.59□□□□□ -1.83
TOP3BO95985 MTCO1P29-201ENST00000496868 288 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 AC078918.1-201ENST00000498515 228 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 AC116562.3-201ENST00000506136 177 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 RNA5SP164-201ENST00000516533 110 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 SNORA25.17-201ENST00000517184 124 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.59□□□□□ -1.83
TOP3BO95985 AC068587.5-201ENST00000528506 175 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 AC018630.1-201ENST00000541376 925 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.59□□□□□ -1.83
TOP3BO95985 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.59□□□□□ -1.83
TOP3BO95985 MIR4424-201ENST00000585257 86 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.59□□□□□ -1.83
TOP3BO95985 AL451007.1-201ENST00000595491 289 ntBASIC3.59□□□□□ -1.83
TOP3BO95985 SNRPGP15-201ENST00000600149 222 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms