Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC091834.1-201ENST00000614543 472 ntBASIC3.28□□□□□ -1.88
RTN3O95197 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.28□□□□□ -1.88
RTN3O95197 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.28□□□□□ -1.88
RTN3O95197 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTN3O95197 AC099654.7-201ENST00000635788 2127 ntBASIC3.28□□□□□ -1.89
RTN3O95197 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.27□□□□□ -1.89
RTN3O95197 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RTN3O95197 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTN3O95197 RNU6-179P-201ENST00000363350 107 ntBASIC3.27□□□□□ -1.89
RTN3O95197 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RTN3O95197 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.27□□□□□ -1.89
RTN3O95197 AL645937.1-202ENST00000421799 937 ntBASIC3.27□□□□□ -1.89
RTN3O95197 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.27□□□□□ -1.89
RTN3O95197 MTATP6P16-201ENST00000434543 526 ntBASIC3.27□□□□□ -1.89
RTN3O95197 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.27□□□□□ -1.89
RTN3O95197 C1DP4-201ENST00000455429 424 ntBASIC3.27□□□□□ -1.89
RTN3O95197 AP001486.1-201ENST00000463339 476 ntBASIC3.27□□□□□ -1.89
RTN3O95197 S100A11P2-201ENST00000467589 312 ntBASIC3.27□□□□□ -1.89
RTN3O95197 AC126182.1-201ENST00000478134 357 ntBASIC3.27□□□□□ -1.89
RTN3O95197 RPS29P20-201ENST00000489592 171 ntBASIC3.27□□□□□ -1.89
RTN3O95197 RPS27AP10-201ENST00000496103 208 ntBASIC3.27□□□□□ -1.89
RTN3O95197 AC026801.1-201ENST00000497178 464 ntBASIC3.27□□□□□ -1.89
RTN3O95197 SUMO2P6-201ENST00000505273 288 ntBASIC3.27□□□□□ -1.89
RTN3O95197 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.27□□□□□ -1.89
RTN3O95197 RPL23AP94-201ENST00000512518 302 ntBASIC3.27□□□□□ -1.89
RTN3O95197 AC008885.1-201ENST00000514930 301 ntBASIC3.27□□□□□ -1.89
RTN3O95197 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.27□□□□□ -1.89
RTN3O95197 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.27□□□□□ -1.89
RTN3O95197 AP001646.1-201ENST00000527936 915 ntBASIC3.27□□□□□ -1.89
RTN3O95197 NACAP3-201ENST00000552100 481 ntBASIC3.27□□□□□ -1.89
RTN3O95197 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.27□□□□□ -1.89
RTN3O95197 MIR15A-201ENST00000607334 83 ntBASIC3.27□□□□□ -1.89
RTN3O95197 AC093783.1-201ENST00000612976 329 ntBASIC3.27□□□□□ -1.89
RTN3O95197 AC011939.3-201ENST00000613686 466 ntBASIC3.27□□□□□ -1.89
RTN3O95197 AC090617.7-201ENST00000623952 126 ntBASIC3.27□□□□□ -1.89
RTN3O95197 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.27□□□□□ -1.89
RTN3O95197 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTN3O95197 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.27□□□□□ -1.89
RTN3O95197 AP003122.5-201ENST00000527668 3766 ntBASIC3.26□□□□□ -1.89
RTN3O95197 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
RTN3O95197 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.26□□□□□ -1.89
RTN3O95197 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.26□□□□□ -1.89
RTN3O95197 RNU6-181P-201ENST00000363225 107 ntBASIC3.26□□□□□ -1.89
RTN3O95197 U3.6-201ENST00000363622 211 ntBASIC3.26□□□□□ -1.89
RTN3O95197 RNU1-140P-201ENST00000365040 165 ntBASIC3.26□□□□□ -1.89
RTN3O95197 RNU6-282P-201ENST00000365357 103 ntBASIC3.26□□□□□ -1.89
RTN3O95197 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RTN3O95197 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.26□□□□□ -1.89
RTN3O95197 RNU6-387P-201ENST00000411331 105 ntBASIC3.26□□□□□ -1.89
RTN3O95197 AL663109.1-201ENST00000411498 844 ntBASIC3.26□□□□□ -1.89
RTN3O95197 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RTN3O95197 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.26□□□□□ -1.89
RTN3O95197 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.26□□□□□ -1.89
RTN3O95197 BPY2DP-201ENST00000422208 265 ntBASIC3.26□□□□□ -1.89
RTN3O95197 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.26□□□□□ -1.89
RTN3O95197 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.26□□□□□ -1.89
RTN3O95197 AL358934.1-201ENST00000432346 324 ntBASIC3.26□□□□□ -1.89
RTN3O95197 MTATP6P7-201ENST00000453315 681 ntBASIC3.26□□□□□ -1.89
RTN3O95197 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.26□□□□□ -1.89
RTN3O95197 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.26□□□□□ -1.89
RTN3O95197 AC022364.2-201ENST00000457963 554 ntBASIC3.26□□□□□ -1.89
RTN3O95197 RPS27P26-201ENST00000494583 239 ntBASIC3.26□□□□□ -1.89
RTN3O95197 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.26□□□□□ -1.89
RTN3O95197 RNU6-445P-201ENST00000516949 107 ntBASIC3.26□□□□□ -1.89
RTN3O95197 RNU6-1315P-201ENST00000517187 99 ntBASIC3.26□□□□□ -1.89
RTN3O95197 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.26□□□□□ -1.89
RTN3O95197 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.26□□□□□ -1.89
RTN3O95197 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.26□□□□□ -1.89
RTN3O95197 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.26□□□□□ -1.89
RTN3O95197 AL158032.1-201ENST00000605401 106 ntBASIC3.26□□□□□ -1.89
RTN3O95197 AC025034.2-201ENST00000623264 286 ntBASIC3.26□□□□□ -1.89
RTN3O95197 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.26□□□□□ -1.89
RTN3O95197 AC103710.2-202ENST00000641454 2853 ntBASIC3.26□□□□□ -1.89
RTN3O95197 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RTN3O95197 AC092435.3-201ENST00000565538 3654 ntBASIC3.26□□□□□ -1.89
RTN3O95197 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
RTN3O95197 MTND5P17-201ENST00000418405 1603 ntBASIC3.26□□□□□ -1.89
RTN3O95197 AC110491.1-201ENST00000562191 2010 ntBASIC3.26□□□□□ -1.89
RTN3O95197 MTND4P35-201ENST00000604257 1375 ntBASIC3.25□□□□□ -1.89
RTN3O95197 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
RTN3O95197 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RTN3O95197 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RTN3O95197 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.25□□□□□ -1.89
RTN3O95197 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.25□□□□□ -1.89
RTN3O95197 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RTN3O95197 SNORA71.1-201ENST00000364523 117 ntBASIC3.25□□□□□ -1.89
RTN3O95197 RNU6-61P-201ENST00000365528 109 ntBASIC3.25□□□□□ -1.89
RTN3O95197 Y_RNA.367-201ENST00000365544 101 ntBASIC3.25□□□□□ -1.89
RTN3O95197 RNU6-1042P-201ENST00000384204 107 ntBASIC3.25□□□□□ -1.89
RTN3O95197 RNU6-456P-201ENST00000384493 107 ntBASIC3.25□□□□□ -1.89
RTN3O95197 AL122016.1-201ENST00000403365 367 ntBASIC3.25□□□□□ -1.89
RTN3O95197 RN7SKP220-201ENST00000410611 288 ntBASIC3.25□□□□□ -1.89
RTN3O95197 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.25□□□□□ -1.89
RTN3O95197 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.25□□□□□ -1.89
RTN3O95197 AL353729.1-201ENST00000425044 720 ntBASIC3.25□□□□□ -1.89
RTN3O95197 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.25□□□□□ -1.89
RTN3O95197 RPS15AP5-201ENST00000436276 388 ntBASIC3.25□□□□□ -1.89
RTN3O95197 RPL39P40-201ENST00000445481 146 ntBASIC3.25□□□□□ -1.89
RTN3O95197 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.25□□□□□ -1.89
RTN3O95197 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms