Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.95□□□□□ -1.78
CDKL5O76039 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.95□□□□□ -1.78
CDKL5O76039 AC012182.1-201ENST00000570133 895 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.95□□□□□ -1.78
CDKL5O76039 MIR1254-2-201ENST00000579553 63 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 AL669831.4-202ENST00000590817 238 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 LLPHP1-201ENST00000603571 367 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 AP001330.4-201ENST00000604350 154 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.95□□□□□ -1.78
CDKL5O76039 uc_338.11-201ENST00000619132 160 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 MIR4496-201ENST00000635896 61 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 MIR7153-201ENST00000637758 57 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
CDKL5O76039 AL356274.2-201ENST00000624379 3752 ntBASIC3.95□□□□□ -1.78
CDKL5O76039 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.95□□□□□ -1.78
CDKL5O76039 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CDKL5O76039 API5P2-201ENST00000397055 1498 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDKL5O76039 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDKL5O76039 RNU4-35P-201ENST00000362588 141 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 RNU6-1252P-201ENST00000363054 104 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 RNU6-960P-201ENST00000364056 120 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDKL5O76039 MIR606-201ENST00000384851 96 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDKL5O76039 PTMAP2-201ENST00000397627 327 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 AL592114.1-201ENST00000403842 483 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 HSPE1P26-201ENST00000405341 275 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 MIR548F5-201ENST00000408421 86 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 RN7SKP27-201ENST00000410684 333 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 RPL21P24-201ENST00000413752 448 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 AL356968.1-201ENST00000416622 474 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.94□□□□□ -1.78
CDKL5O76039 BX842559.1-201ENST00000419615 532 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 RPL7P46-201ENST00000425129 740 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.94□□□□□ -1.78
CDKL5O76039 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.94□□□□□ -1.78
CDKL5O76039 Y_RNA.639-201ENST00000458981 102 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.94□□□□□ -1.78
CDKL5O76039 AC010401.1-201ENST00000463867 348 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.94□□□□□ -1.78
CDKL5O76039 AC104806.1-201ENST00000508720 308 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.94□□□□□ -1.78
CDKL5O76039 AC108078.2-201ENST00000510750 236 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 AC005741.1-201ENST00000511094 432 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 RN7SKP234-201ENST00000517173 224 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.94□□□□□ -1.78
CDKL5O76039 AL137161.1-201ENST00000532231 390 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.94□□□□□ -1.78
CDKL5O76039 ELOCP31-201ENST00000540463 467 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 AC011602.1-201ENST00000546484 331 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 AL031176.1-201ENST00000604554 466 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 AC245389.1-201ENST00000605141 529 ntBASIC3.94□□□□□ -1.78
CDKL5O76039 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.94□□□□□ -1.78
CDKL5O76039 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.94□□□□□ -1.78
CDKL5O76039 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDKL5O76039 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDKL5O76039 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDKL5O76039 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.93□□□□□ -1.78
CDKL5O76039 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDKL5O76039 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.93□□□□□ -1.78
CDKL5O76039 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CDKL5O76039 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.93□□□□□ -1.78
CDKL5O76039 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDKL5O76039 RNU6-1287P-201ENST00000362914 107 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 SNORA73.2-201ENST00000364946 201 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 SNORA62.3-201ENST00000365110 153 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 SNORA4.3-201ENST00000365564 137 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 AP002088.1-201ENST00000382740 395 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 RNU6-738P-201ENST00000384531 106 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 RNU6-1060P-201ENST00000384664 107 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 MIR134-201ENST00000385258 73 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 RNU6-1304P-201ENST00000411374 106 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.93□□□□□ -1.78
CDKL5O76039 VN1R36P-201ENST00000414936 291 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 MTCO2P27-201ENST00000420740 428 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 AC005517.2-201ENST00000424673 553 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.93□□□□□ -1.78
CDKL5O76039 GAPDHP27-201ENST00000447427 1020 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.93□□□□□ -1.78
CDKL5O76039 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.93□□□□□ -1.78
CDKL5O76039 Y_RNA.635-201ENST00000459041 101 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 AC027575.1-201ENST00000481064 460 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.93□□□□□ -1.78
CDKL5O76039 AC110768.1-201ENST00000509222 400 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 AC098591.2-201ENST00000510152 315 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 AC023141.12-201ENST00000512399 199 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 AC010265.1-201ENST00000513509 211 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 RNU6-1170P-201ENST00000515974 106 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 MIR2276-201ENST00000516886 89 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.93□□□□□ -1.78
CDKL5O76039 OR5D17P-201ENST00000531492 978 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 AP000889.2-201ENST00000532684 490 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.93□□□□□ -1.78
CDKL5O76039 AL355812.1-201ENST00000603215 216 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 AC116312.1-201ENST00000606841 314 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 U3.45-201ENST00000607547 219 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 AC040896.1-201ENST00000613819 479 ntBASIC3.93□□□□□ -1.78
CDKL5O76039 AC084781.2-201ENST00000615568 161 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms