Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.14□□□□□ -1.59
GFRA3O60609 AC007390.2-201ENST00000606229 3803 ntBASIC5.14□□□□□ -1.59
GFRA3O60609 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.14□□□□□ -1.59
GFRA3O60609 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
GFRA3O60609 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.14□□□□□ -1.59
GFRA3O60609 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA3O60609 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.13□□□□□ -1.59
GFRA3O60609 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
GFRA3O60609 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA3O60609 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.13□□□□□ -1.59
GFRA3O60609 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.13□□□□□ -1.59
GFRA3O60609 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.13□□□□□ -1.59
GFRA3O60609 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA3O60609 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA3O60609 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA3O60609 MIR412-201ENST00000362142 91 ntBASIC5.13□□□□□ -1.59
GFRA3O60609 RNU6-497P-201ENST00000365316 104 ntBASIC5.13□□□□□ -1.59
GFRA3O60609 RPL21P17-201ENST00000397467 475 ntBASIC5.13□□□□□ -1.59
GFRA3O60609 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.13□□□□□ -1.59
GFRA3O60609 AL031736.2-201ENST00000426573 787 ntBASIC5.13□□□□□ -1.59
GFRA3O60609 RPL23AP1-201ENST00000428990 471 ntBASIC5.13□□□□□ -1.59
GFRA3O60609 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.13□□□□□ -1.59
GFRA3O60609 snoU13.24-201ENST00000458998 104 ntBASIC5.13□□□□□ -1.59
GFRA3O60609 SNORA67.7-201ENST00000516664 135 ntBASIC5.13□□□□□ -1.59
GFRA3O60609 RNA5SP143-201ENST00000516936 115 ntBASIC5.13□□□□□ -1.59
GFRA3O60609 CYCSP29-201ENST00000533731 318 ntBASIC5.13□□□□□ -1.59
GFRA3O60609 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC5.13□□□□□ -1.59
GFRA3O60609 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC5.13□□□□□ -1.59
GFRA3O60609 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GFRA3O60609 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
GFRA3O60609 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
GFRA3O60609 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
GFRA3O60609 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
GFRA3O60609 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.12□□□□□ -1.59
GFRA3O60609 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GFRA3O60609 MIR208A-201ENST00000362287 71 ntBASIC5.12□□□□□ -1.59
GFRA3O60609 RNA5SP52-201ENST00000362448 134 ntBASIC5.12□□□□□ -1.59
GFRA3O60609 Y_RNA.313-201ENST00000365095 103 ntBASIC5.12□□□□□ -1.59
GFRA3O60609 RNU6-383P-201ENST00000410864 94 ntBASIC5.12□□□□□ -1.59
GFRA3O60609 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.12□□□□□ -1.59
GFRA3O60609 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.12□□□□□ -1.59
GFRA3O60609 RPL21P6-201ENST00000479171 504 ntBASIC5.12□□□□□ -1.59
GFRA3O60609 RN7SL319P-201ENST00000480656 221 ntBASIC5.12□□□□□ -1.59
GFRA3O60609 RPL23AP70-201ENST00000483361 460 ntBASIC5.12□□□□□ -1.59
GFRA3O60609 RN7SKP289-201ENST00000517244 295 ntBASIC5.12□□□□□ -1.59
GFRA3O60609 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.12□□□□□ -1.59
GFRA3O60609 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.12□□□□□ -1.59
GFRA3O60609 AC008489.1-201ENST00000524271 483 ntBASIC5.12□□□□□ -1.59
GFRA3O60609 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.12□□□□□ -1.59
GFRA3O60609 MIR3158-1-201ENST00000583596 81 ntBASIC5.12□□□□□ -1.59
GFRA3O60609 AL031274.2-201ENST00000599419 203 ntBASIC5.12□□□□□ -1.59
GFRA3O60609 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GFRA3O60609 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GFRA3O60609 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.12□□□□□ -1.59
GFRA3O60609 AC022893.2-201ENST00000564832 3296 ntBASIC5.12□□□□□ -1.59
GFRA3O60609 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
GFRA3O60609 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
GFRA3O60609 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GFRA3O60609 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.12□□□□□ -1.59
GFRA3O60609 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GFRA3O60609 AL353796.1-201ENST00000561542 3241 ntBASIC5.12□□□□□ -1.59
GFRA3O60609 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GFRA3O60609 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GFRA3O60609 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GFRA3O60609 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GFRA3O60609 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.11□□□□□ -1.59
GFRA3O60609 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GFRA3O60609 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
GFRA3O60609 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GFRA3O60609 AC010300.1-201ENST00000600671 5134 ntBASIC5.11□□□□□ -1.59
GFRA3O60609 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GFRA3O60609 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GFRA3O60609 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.11□□□□□ -1.59
GFRA3O60609 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.11□□□□□ -1.59
GFRA3O60609 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
GFRA3O60609 U3.3-201ENST00000362986 216 ntBASIC5.11□□□□□ -1.59
GFRA3O60609 SNORA62.3-201ENST00000365110 153 ntBASIC5.11□□□□□ -1.59
GFRA3O60609 Y_RNA.498-201ENST00000384460 102 ntBASIC5.11□□□□□ -1.59
GFRA3O60609 SNORA66-201ENST00000384792 133 ntBASIC5.11□□□□□ -1.59
GFRA3O60609 MIR1182-201ENST00000408363 97 ntBASIC5.11□□□□□ -1.59
GFRA3O60609 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.11□□□□□ -1.59
GFRA3O60609 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.11□□□□□ -1.59
GFRA3O60609 snoU13.7-201ENST00000459220 104 ntBASIC5.11□□□□□ -1.59
GFRA3O60609 AC092754.1-201ENST00000472975 479 ntBASIC5.11□□□□□ -1.59
GFRA3O60609 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.11□□□□□ -1.59
GFRA3O60609 AC005912.1-201ENST00000495392 255 ntBASIC5.11□□□□□ -1.59
GFRA3O60609 RN7SKP276-201ENST00000516242 268 ntBASIC5.11□□□□□ -1.59
GFRA3O60609 AC093331.1-201ENST00000521474 169 ntBASIC5.11□□□□□ -1.59
GFRA3O60609 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC5.11□□□□□ -1.59
GFRA3O60609 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.11□□□□□ -1.59
GFRA3O60609 AC131055.1-201ENST00000584626 316 ntBASIC5.11□□□□□ -1.59
GFRA3O60609 AC105254.2-201ENST00000603636 436 ntBASIC5.11□□□□□ -1.59
GFRA3O60609 AL355816.1-201ENST00000607951 118 ntBASIC5.11□□□□□ -1.59
GFRA3O60609 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.11□□□□□ -1.59
GFRA3O60609 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GFRA3O60609 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GFRA3O60609 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
GFRA3O60609 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
GFRA3O60609 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
GFRA3O60609 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms