Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SNORA80A-201ENST00000363922 136 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 RNU4-20P-201ENST00000365601 151 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 RNU6-831P-201ENST00000384548 107 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SLC28A2O43868 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC28A2O43868 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC28A2O43868 RPL31P12-201ENST00000422587 358 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 AL158071.1-201ENST00000430315 461 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 OR4K11P-201ENST00000431829 904 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC28A2O43868 UBE2V1P13-201ENST00000436983 439 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC28A2O43868 MRPS17P3-201ENST00000465453 385 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 AL049714.1-201ENST00000466686 347 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC28A2O43868 AC084357.1-201ENST00000473404 255 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 ST13P14-201ENST00000474095 734 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 HMGB1P22-201ENST00000505315 124 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 AC105417.1-201ENST00000514691 285 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 RNU6-327P-201ENST00000516270 127 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC28A2O43868 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.35□□□□□ -1.87
SLC28A2O43868 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC28A2O43868 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC28A2O43868 BNIP3P6-201ENST00000549284 499 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 AC005668.1-201ENST00000571142 476 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 OR4K8P-201ENST00000578842 1048 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC28A2O43868 XIAPP1-201ENST00000603162 600 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 AC006023.1-201ENST00000603944 259 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 MIR7106-201ENST00000612419 65 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 AC104237.2-201ENST00000612456 443 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SLC28A2O43868 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC28A2O43868 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC28A2O43868 AL133216.2-202ENST00000634512 349 ntBASIC3.35□□□□□ -1.87
SLC28A2O43868 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC28A2O43868 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SLC28A2O43868 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC28A2O43868 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC28A2O43868 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC28A2O43868 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SLC28A2O43868 AL138713.1-201ENST00000624026 2130 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SLC28A2O43868 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
SLC28A2O43868 AC004972.1-201ENST00000623934 2209 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 Y_RNA.231-201ENST00000364358 102 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 MIR514A2-201ENST00000385131 88 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 MIR514A3-201ENST00000385132 88 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 MIR454-201ENST00000390180 115 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 RPL5P18-201ENST00000406671 891 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 NCOR1P3-201ENST00000420479 303 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC28A2O43868 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC28A2O43868 ERLEC1P1-201ENST00000433806 578 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 MTATP6P16-201ENST00000434543 526 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 RPL32P28-201ENST00000443577 397 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 AC007547.1-201ENST00000462177 490 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.34□□□□□ -1.87
SLC28A2O43868 RNA5SP341-201ENST00000516261 117 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 RNU6-1045P-201ENST00000516321 107 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 RNU6-579P-201ENST00000516879 102 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SLC28A2O43868 AP005435.4-201ENST00000529514 284 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC28A2O43868 AC018630.1-201ENST00000541376 925 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC28A2O43868 CR383656.7-201ENST00000548164 174 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC28A2O43868 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC28A2O43868 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SLC28A2O43868 MIR3690-201ENST00000580266 75 ntBASIC3.34□□□□□ -1.87
SLC28A2O43868 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC28A2O43868 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC28A2O43868 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC28A2O43868 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC28A2O43868 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SLC28A2O43868 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.88
SLC28A2O43868 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
SLC28A2O43868 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.34□□□□□ -1.88
SLC28A2O43868 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.34□□□□□ -1.88
SLC28A2O43868 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SLC28A2O43868 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.34□□□□□ -1.88
SLC28A2O43868 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.34□□□□□ -1.88
SLC28A2O43868 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SLC28A2O43868 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SLC28A2O43868 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC28A2O43868 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SLC28A2O43868 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC28A2O43868 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SLC28A2O43868 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
SLC28A2O43868 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC28A2O43868 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC28A2O43868 RNU6-1155P-201ENST00000363554 107 ntBASIC3.33□□□□□ -1.88
SLC28A2O43868 RNU5A-8P-201ENST00000364102 114 ntBASIC3.33□□□□□ -1.88
SLC28A2O43868 Y_RNA.387-201ENST00000383918 102 ntBASIC3.33□□□□□ -1.88
SLC28A2O43868 RNU6-38P-201ENST00000384085 107 ntBASIC3.33□□□□□ -1.88
SLC28A2O43868 MIR558-201ENST00000384920 94 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms