Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RNU4-11P-201ENST00000365287 132 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 RNU6-741P-201ENST00000383889 107 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 SNORA20-201ENST00000384662 132 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 MIR1286-201ENST00000408112 78 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 RNU6-1001P-201ENST00000411265 100 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.58□□□□□ -1.52
ACTN4O43707 AC119751.6-201ENST00000416712 186 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 DDX39BP1-205ENST00000422507 192 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 PTGES3P4-201ENST00000426243 356 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.58□□□□□ -1.52
ACTN4O43707 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.58□□□□□ -1.52
ACTN4O43707 OR2AO1P-201ENST00000476497 403 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 AL049874.1-201ENST00000489560 388 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 RNA5SP43-201ENST00000516559 110 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.58□□□□□ -1.52
ACTN4O43707 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.58□□□□□ -1.52
ACTN4O43707 AC004825.2-201ENST00000616634 455 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ACTN4O43707 U73479.1-201ENST00000618062 168 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 MIR4302-201ENST00000638058 60 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 FAM91A3P-201ENST00000456826 2544 ntBASIC5.58□□□□□ -1.52
ACTN4O43707 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.58□□□□□ -1.52
ACTN4O43707 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ACTN4O43707 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
ACTN4O43707 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.58□□□□□ -1.52
ACTN4O43707 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.58□□□□□ -1.52
ACTN4O43707 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.58□□□□□ -1.52
ACTN4O43707 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
ACTN4O43707 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ACTN4O43707 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ACTN4O43707 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ACTN4O43707 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ACTN4O43707 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.57□□□□□ -1.52
ACTN4O43707 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.57□□□□□ -1.52
ACTN4O43707 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
ACTN4O43707 RNU4-80P-201ENST00000363200 141 ntBASIC5.57□□□□□ -1.52
ACTN4O43707 RNA5SP197-201ENST00000363357 119 ntBASIC5.57□□□□□ -1.52
ACTN4O43707 RNU6-1286P-201ENST00000383871 107 ntBASIC5.57□□□□□ -1.52
ACTN4O43707 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.57□□□□□ -1.52
ACTN4O43707 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.57□□□□□ -1.52
ACTN4O43707 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.57□□□□□ -1.52
ACTN4O43707 CYCSP32-201ENST00000440548 321 ntBASIC5.57□□□□□ -1.52
ACTN4O43707 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.57□□□□□ -1.52
ACTN4O43707 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.57□□□□□ -1.52
ACTN4O43707 AC016925.1-201ENST00000458303 298 ntBASIC5.57□□□□□ -1.52
ACTN4O43707 RN7SL517P-201ENST00000462240 305 ntBASIC5.57□□□□□ -1.52
ACTN4O43707 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.57□□□□□ -1.52
ACTN4O43707 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ACTN4O43707 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.57□□□□□ -1.52
ACTN4O43707 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.57□□□□□ -1.52
ACTN4O43707 RNU6-191P-201ENST00000516295 94 ntBASIC5.57□□□□□ -1.52
ACTN4O43707 RNU7-121P-201ENST00000516604 62 ntBASIC5.57□□□□□ -1.52
ACTN4O43707 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ACTN4O43707 CYCSP40-201ENST00000575927 294 ntBASIC5.57□□□□□ -1.52
ACTN4O43707 MIR4782-201ENST00000577987 79 ntBASIC5.57□□□□□ -1.52
ACTN4O43707 MIR3176-201ENST00000582210 90 ntBASIC5.57□□□□□ -1.52
ACTN4O43707 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.57□□□□□ -1.52
ACTN4O43707 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
ACTN4O43707 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ACTN4O43707 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ACTN4O43707 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ACTN4O43707 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ACTN4O43707 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
ACTN4O43707 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.57□□□□□ -1.52
ACTN4O43707 AL353743.1-202ENST00000431724 1695 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ACTN4O43707 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ACTN4O43707 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
ACTN4O43707 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ACTN4O43707 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
ACTN4O43707 RNU6-275P-201ENST00000364910 107 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 RNU6-213P-201ENST00000384051 104 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 RNU6-281P-201ENST00000384212 103 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 RNU6-171P-201ENST00000384354 107 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 MIR10B-201ENST00000385011 110 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 RN7SKP206-201ENST00000410823 293 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 RPL7AP25-201ENST00000423357 805 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 BTF3P11-201ENST00000426582 477 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 AC007560.1-201ENST00000426912 237 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.56□□□□□ -1.52
ACTN4O43707 PPIAP20-201ENST00000449839 135 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 FABP5P15-201ENST00000453566 214 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.56□□□□□ -1.52
ACTN4O43707 snoU13.3-201ENST00000459441 104 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 SNRPCP2-201ENST00000504370 475 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 BTF3L4P4-201ENST00000506381 449 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 Y_RNA.797-201ENST00000515977 94 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 RNA5SP392-201ENST00000516905 112 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.56□□□□□ -1.52
ACTN4O43707 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.56□□□□□ -1.52
ACTN4O43707 BNIP3P1-201ENST00000547295 580 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.56□□□□□ -1.52
ACTN4O43707 AC011447.4-201ENST00000587562 111 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 AL670379.2-201ENST00000604983 252 ntBASIC5.56□□□□□ -1.52
ACTN4O43707 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.56□□□□□ -1.52
ACTN4O43707 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
ACTN4O43707 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.56□□□□□ -1.52
ACTN4O43707 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
ACTN4O43707 AC009812.4-201ENST00000569134 1805 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms