Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.27□□□□□ -1.89
LDB2O43679 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.27□□□□□ -1.89
LDB2O43679 AC011712.1-201ENST00000588959 234 ntBASIC3.27□□□□□ -1.89
LDB2O43679 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.27□□□□□ -1.89
LDB2O43679 AC104763.2-201ENST00000604179 382 ntBASIC3.27□□□□□ -1.89
LDB2O43679 AC012409.4-201ENST00000612923 249 ntBASIC3.27□□□□□ -1.89
LDB2O43679 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.27□□□□□ -1.89
LDB2O43679 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
LDB2O43679 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LDB2O43679 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDB2O43679 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LDB2O43679 MTND4P14-201ENST00000435799 1354 ntBASIC3.26□□□□□ -1.89
LDB2O43679 AL021368.2-201ENST00000606125 5352 ntBASIC3.26□□□□□ -1.89
LDB2O43679 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LDB2O43679 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.26□□□□□ -1.89
LDB2O43679 RNU6-797P-201ENST00000363101 109 ntBASIC3.26□□□□□ -1.89
LDB2O43679 RNU4-20P-201ENST00000365601 151 ntBASIC3.26□□□□□ -1.89
LDB2O43679 RNU6-332P-201ENST00000391193 108 ntBASIC3.26□□□□□ -1.89
LDB2O43679 UBE2V1P2-201ENST00000397758 440 ntBASIC3.26□□□□□ -1.89
LDB2O43679 RNA5SP120-201ENST00000410900 112 ntBASIC3.26□□□□□ -1.89
LDB2O43679 RNU2-71P-201ENST00000411395 189 ntBASIC3.26□□□□□ -1.89
LDB2O43679 AC007390.1-201ENST00000415722 356 ntBASIC3.26□□□□□ -1.89
LDB2O43679 AC009161.1-201ENST00000417306 376 ntBASIC3.26□□□□□ -1.89
LDB2O43679 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB2O43679 AL451054.2-201ENST00000420896 202 ntBASIC3.26□□□□□ -1.89
LDB2O43679 RPL7P46-201ENST00000425129 740 ntBASIC3.26□□□□□ -1.89
LDB2O43679 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.26□□□□□ -1.89
LDB2O43679 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.26□□□□□ -1.89
LDB2O43679 ERLEC1P1-201ENST00000433806 578 ntBASIC3.26□□□□□ -1.89
LDB2O43679 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.26□□□□□ -1.89
LDB2O43679 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB2O43679 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.26□□□□□ -1.89
LDB2O43679 RNU7-180P-201ENST00000459240 63 ntBASIC3.26□□□□□ -1.89
LDB2O43679 HMGN2P26-201ENST00000463169 339 ntBASIC3.26□□□□□ -1.89
LDB2O43679 RN7SL442P-201ENST00000473804 320 ntBASIC3.26□□□□□ -1.89
LDB2O43679 AC091885.1-201ENST00000506658 268 ntBASIC3.26□□□□□ -1.89
LDB2O43679 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB2O43679 AC117522.3-201ENST00000507974 584 ntBASIC3.26□□□□□ -1.89
LDB2O43679 RNU6-1073P-201ENST00000517182 106 ntBASIC3.26□□□□□ -1.89
LDB2O43679 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB2O43679 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB2O43679 MED28P6-201ENST00000558776 231 ntBASIC3.26□□□□□ -1.89
LDB2O43679 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB2O43679 MIR3186-201ENST00000577404 85 ntBASIC3.26□□□□□ -1.89
LDB2O43679 FGF7P1-201ENST00000582820 288 ntBASIC3.26□□□□□ -1.89
LDB2O43679 MIR4424-201ENST00000585257 86 ntBASIC3.26□□□□□ -1.89
LDB2O43679 AC008521.1-201ENST00000587471 187 ntBASIC3.26□□□□□ -1.89
LDB2O43679 AC073657.2-201ENST00000605661 303 ntBASIC3.26□□□□□ -1.89
LDB2O43679 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.26□□□□□ -1.89
LDB2O43679 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.26□□□□□ -1.89
LDB2O43679 AL355810.1-201ENST00000614629 552 ntBASIC3.26□□□□□ -1.89
LDB2O43679 AC092628.2-201ENST00000622492 339 ntBASIC3.26□□□□□ -1.89
LDB2O43679 AC100810.6-201ENST00000638068 285 ntBASIC3.26□□□□□ -1.89
LDB2O43679 AC116096.1-201ENST00000566804 2314 ntBASIC3.26□□□□□ -1.89
LDB2O43679 AF117829.1-206ENST00000621883 3802 ntBASIC3.26□□□□□ -1.89
LDB2O43679 TPTE2P4-201ENST00000258589 1605 ntBASIC3.26□□□□□ -1.89
LDB2O43679 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LDB2O43679 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LDB2O43679 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LDB2O43679 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
LDB2O43679 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
LDB2O43679 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
LDB2O43679 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
LDB2O43679 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.25□□□□□ -1.89
LDB2O43679 RNU4-66P-201ENST00000365199 138 ntBASIC3.25□□□□□ -1.89
LDB2O43679 RNU6-38P-201ENST00000384085 107 ntBASIC3.25□□□□□ -1.89
LDB2O43679 RNU6-767P-201ENST00000384132 107 ntBASIC3.25□□□□□ -1.89
LDB2O43679 RNU6-190P-201ENST00000384154 102 ntBASIC3.25□□□□□ -1.89
LDB2O43679 RNU6-14P-201ENST00000384630 106 ntBASIC3.25□□□□□ -1.89
LDB2O43679 U3.19-201ENST00000390893 196 ntBASIC3.25□□□□□ -1.89
LDB2O43679 RNU6-550P-201ENST00000391057 101 ntBASIC3.25□□□□□ -1.89
LDB2O43679 RNU6-817P-201ENST00000391083 104 ntBASIC3.25□□□□□ -1.89
LDB2O43679 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
LDB2O43679 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LDB2O43679 AL162578.1-201ENST00000406202 378 ntBASIC3.25□□□□□ -1.89
LDB2O43679 AP000567.1-201ENST00000406413 156 ntBASIC3.25□□□□□ -1.89
LDB2O43679 RN7SKP140-201ENST00000411196 284 ntBASIC3.25□□□□□ -1.89
LDB2O43679 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.25□□□□□ -1.89
LDB2O43679 AC063979.1-201ENST00000415539 377 ntBASIC3.25□□□□□ -1.89
LDB2O43679 RPL31P12-201ENST00000422587 358 ntBASIC3.25□□□□□ -1.89
LDB2O43679 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.25□□□□□ -1.89
LDB2O43679 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.25□□□□□ -1.89
LDB2O43679 ARF4P2-201ENST00000430209 526 ntBASIC3.25□□□□□ -1.89
LDB2O43679 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.25□□□□□ -1.89
LDB2O43679 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.25□□□□□ -1.89
LDB2O43679 FABP5P13-201ENST00000452144 328 ntBASIC3.25□□□□□ -1.89
LDB2O43679 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.25□□□□□ -1.89
LDB2O43679 RNU6-333P-201ENST00000459117 107 ntBASIC3.25□□□□□ -1.89
LDB2O43679 RPL21P8-201ENST00000465083 535 ntBASIC3.25□□□□□ -1.89
LDB2O43679 RN7SL330P-201ENST00000469709 307 ntBASIC3.25□□□□□ -1.89
LDB2O43679 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.25□□□□□ -1.89
LDB2O43679 HMGB3P15-201ENST00000507326 574 ntBASIC3.25□□□□□ -1.89
LDB2O43679 RNU1-143P-201ENST00000516296 146 ntBASIC3.25□□□□□ -1.89
LDB2O43679 RNU6-677P-201ENST00000516914 101 ntBASIC3.25□□□□□ -1.89
LDB2O43679 PSMA2P1-201ENST00000526365 646 ntBASIC3.25□□□□□ -1.89
LDB2O43679 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LDB2O43679 AL137161.1-201ENST00000532231 390 ntBASIC3.25□□□□□ -1.89
LDB2O43679 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
LDB2O43679 HIGD1AP1-201ENST00000550979 275 ntBASIC3.25□□□□□ -1.89
LDB2O43679 AC078814.3-201ENST00000553036 491 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms