Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC130324.3-201ENST00000614165 542 ntBASIC3.41□□□□□ -1.86
MSI1O43347 AC090132.2-201ENST00000615881 347 ntBASIC3.41□□□□□ -1.86
MSI1O43347 MTND5P42-201ENST00000637720 498 ntBASIC3.41□□□□□ -1.86
MSI1O43347 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.41□□□□□ -1.86
MSI1O43347 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
MSI1O43347 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.41□□□□□ -1.86
MSI1O43347 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MSI1O43347 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.41□□□□□ -1.86
MSI1O43347 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
MSI1O43347 AC017071.1-201ENST00000564407 2204 ntBASIC3.4□□□□□ -1.86
MSI1O43347 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.86
MSI1O43347 AC093908.1-201ENST00000623125 8092 ntBASIC3.4□□□□□ -1.86
MSI1O43347 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
MSI1O43347 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
MSI1O43347 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
MSI1O43347 Y_RNA.70-201ENST00000362886 110 ntBASIC3.4□□□□□ -1.87
MSI1O43347 RNU6-288P-201ENST00000363690 104 ntBASIC3.4□□□□□ -1.87
MSI1O43347 SNORA51.2-201ENST00000364595 132 ntBASIC3.4□□□□□ -1.87
MSI1O43347 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
MSI1O43347 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
MSI1O43347 RNU6-38P-201ENST00000384085 107 ntBASIC3.4□□□□□ -1.87
MSI1O43347 RNU6-190P-201ENST00000384154 102 ntBASIC3.4□□□□□ -1.87
MSI1O43347 SNORD37.1-201ENST00000390968 65 ntBASIC3.4□□□□□ -1.87
MSI1O43347 RNU6-817P-201ENST00000391083 104 ntBASIC3.4□□□□□ -1.87
MSI1O43347 RNA5SP229-201ENST00000410809 99 ntBASIC3.4□□□□□ -1.87
MSI1O43347 RNU6-373P-201ENST00000411247 98 ntBASIC3.4□□□□□ -1.87
MSI1O43347 RNU6-387P-201ENST00000411331 105 ntBASIC3.4□□□□□ -1.87
MSI1O43347 AL513331.1-201ENST00000411908 397 ntBASIC3.4□□□□□ -1.87
MSI1O43347 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
MSI1O43347 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.4□□□□□ -1.87
MSI1O43347 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.4□□□□□ -1.87
MSI1O43347 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.4□□□□□ -1.87
MSI1O43347 VDAC1P3-201ENST00000434069 851 ntBASIC3.4□□□□□ -1.87
MSI1O43347 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.4□□□□□ -1.87
MSI1O43347 USP9YP8-201ENST00000441913 500 ntBASIC3.4□□□□□ -1.87
MSI1O43347 FABP5P13-201ENST00000452144 328 ntBASIC3.4□□□□□ -1.87
MSI1O43347 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.4□□□□□ -1.87
MSI1O43347 RNU6-333P-201ENST00000459117 107 ntBASIC3.4□□□□□ -1.87
MSI1O43347 HMGN2P26-201ENST00000463169 339 ntBASIC3.4□□□□□ -1.87
MSI1O43347 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
MSI1O43347 RN7SL504P-201ENST00000494496 287 ntBASIC3.4□□□□□ -1.87
MSI1O43347 AC091951.2-201ENST00000500762 203 ntBASIC3.4□□□□□ -1.87
MSI1O43347 AC008628.2-201ENST00000502605 298 ntBASIC3.4□□□□□ -1.87
MSI1O43347 Y_RNA.689-201ENST00000516589 107 ntBASIC3.4□□□□□ -1.87
MSI1O43347 RN7SKP289-201ENST00000517244 295 ntBASIC3.4□□□□□ -1.87
MSI1O43347 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.4□□□□□ -1.87
MSI1O43347 MIR5680-201ENST00000577577 84 ntBASIC3.4□□□□□ -1.87
MSI1O43347 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.4□□□□□ -1.87
MSI1O43347 AC005000.2-201ENST00000605468 310 ntBASIC3.4□□□□□ -1.87
MSI1O43347 AC073657.2-201ENST00000605661 303 ntBASIC3.4□□□□□ -1.87
MSI1O43347 uc_338.1-201ENST00000612113 180 ntBASIC3.4□□□□□ -1.87
MSI1O43347 SNORD39.4-201ENST00000620099 78 ntBASIC3.4□□□□□ -1.87
MSI1O43347 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.4□□□□□ -1.87
MSI1O43347 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.4□□□□□ -1.87
MSI1O43347 MIR3651-201ENST00000630427 90 ntBASIC3.4□□□□□ -1.87
MSI1O43347 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.4□□□□□ -1.87
MSI1O43347 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
MSI1O43347 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
MSI1O43347 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
MSI1O43347 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MSI1O43347 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.39□□□□□ -1.87
MSI1O43347 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MSI1O43347 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MSI1O43347 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.39□□□□□ -1.87
MSI1O43347 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
MSI1O43347 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MSI1O43347 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.39□□□□□ -1.87
MSI1O43347 RNU6-1287P-201ENST00000362914 107 ntBASIC3.39□□□□□ -1.87
MSI1O43347 Y_RNA.157-201ENST00000363638 102 ntBASIC3.39□□□□□ -1.87
MSI1O43347 Y_RNA.231-201ENST00000364358 102 ntBASIC3.39□□□□□ -1.87
MSI1O43347 RNU6-805P-201ENST00000365643 106 ntBASIC3.39□□□□□ -1.87
MSI1O43347 RNU6-1060P-201ENST00000384664 107 ntBASIC3.39□□□□□ -1.87
MSI1O43347 RNU6-332P-201ENST00000391193 108 ntBASIC3.39□□□□□ -1.87
MSI1O43347 AL606923.1-201ENST00000406616 190 ntBASIC3.39□□□□□ -1.87
MSI1O43347 RNU6-1148P-201ENST00000410992 104 ntBASIC3.39□□□□□ -1.87
MSI1O43347 OR6C66P-201ENST00000414917 930 ntBASIC3.39□□□□□ -1.87
MSI1O43347 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.39□□□□□ -1.87
MSI1O43347 CYCSP32-201ENST00000440548 321 ntBASIC3.39□□□□□ -1.87
MSI1O43347 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.39□□□□□ -1.87
MSI1O43347 PMCHL2-203ENST00000457791 237 ntBASIC3.39□□□□□ -1.87
MSI1O43347 AP002884.2-201ENST00000471647 395 ntBASIC3.39□□□□□ -1.87
MSI1O43347 RPS4XP22-201ENST00000480755 780 ntBASIC3.39□□□□□ -1.87
MSI1O43347 HMGN1P12-201ENST00000499125 195 ntBASIC3.39□□□□□ -1.87
MSI1O43347 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.39□□□□□ -1.87
MSI1O43347 CCDC34P1-201ENST00000507441 517 ntBASIC3.39□□□□□ -1.87
MSI1O43347 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.39□□□□□ -1.87
MSI1O43347 AC114786.4-201ENST00000508771 728 ntBASIC3.39□□□□□ -1.87
MSI1O43347 AC114781.4-201ENST00000513707 639 ntBASIC3.39□□□□□ -1.87
MSI1O43347 RNU6-927P-201ENST00000516199 100 ntBASIC3.39□□□□□ -1.87
MSI1O43347 SCARNA15.2-201ENST00000516409 127 ntBASIC3.39□□□□□ -1.87
MSI1O43347 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.39□□□□□ -1.87
MSI1O43347 OR5D17P-201ENST00000531492 978 ntBASIC3.39□□□□□ -1.87
MSI1O43347 AP004242.1-201ENST00000533701 349 ntBASIC3.39□□□□□ -1.87
MSI1O43347 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.39□□□□□ -1.87
MSI1O43347 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.39□□□□□ -1.87
MSI1O43347 AC078814.3-201ENST00000553036 491 ntBASIC3.39□□□□□ -1.87
MSI1O43347 AL118558.2-201ENST00000556294 238 ntBASIC3.39□□□□□ -1.87
MSI1O43347 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.39□□□□□ -1.87
MSI1O43347 MIR3921-201ENST00000577308 85 ntBASIC3.39□□□□□ -1.87
MSI1O43347 MIR3690-201ENST00000580266 75 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms