Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SUMO2P20-201ENST00000520803 283 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.72□□□□□ -1.81
TRIM38O00635 AC023050.3-201ENST00000541142 333 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM38O00635 SCOCP1-201ENST00000554676 349 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.72□□□□□ -1.81
TRIM38O00635 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 VN1R107P-201ENST00000601784 209 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM38O00635 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM38O00635 AL132822.1-201ENST00000617063 513 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM38O00635 TPTE2P4-201ENST00000258589 1605 ntBASIC3.72□□□□□ -1.81
TRIM38O00635 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM38O00635 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM38O00635 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM38O00635 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM38O00635 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM38O00635 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
TRIM38O00635 MIR369-201ENST00000362155 70 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM38O00635 RNU6-641P-201ENST00000384006 107 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 RNU6-456P-201ENST00000384493 107 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 MIR199A2-201ENST00000385289 110 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 PTMAP5-201ENST00000393073 333 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 RPS4XP8-201ENST00000402039 771 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 MTCYBP8-201ENST00000422855 651 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM38O00635 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
TRIM38O00635 Z82210.1-201ENST00000440037 231 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 AC016691.1-201ENST00000441321 413 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 RPS29P31-201ENST00000446147 164 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.71□□□□□ -1.82
TRIM38O00635 RNU6-953P-201ENST00000459154 107 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 AC074250.1-201ENST00000511117 192 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 IGKV2-23-201ENST00000518729 323 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM38O00635 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.71□□□□□ -1.82
TRIM38O00635 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM38O00635 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM38O00635 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM38O00635 MIR3200-201ENST00000580767 85 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 DPPA3P3-201ENST00000603842 430 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 AC104763.2-201ENST00000604179 382 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 AC021646.1-201ENST00000605469 484 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 AC007619.2-201ENST00000605743 379 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 RNU1-30P-201ENST00000606575 163 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 AL133215.3-201ENST00000609801 448 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 RNVU1-4-201ENST00000612985 164 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 AC002076.2-201ENST00000617362 122 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 AL589994.2-201ENST00000621124 579 ntBASIC3.71□□□□□ -1.82
TRIM38O00635 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
TRIM38O00635 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM38O00635 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
TRIM38O00635 AF117829.1-206ENST00000621883 3802 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
TRIM38O00635 Y_RNA.367-201ENST00000365544 101 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 SNORA69-201ENST00000383895 132 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 Y_RNA.422-201ENST00000384054 114 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 RNU6-43P-201ENST00000384302 107 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 RNU6-1105P-201ENST00000384774 107 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 MIR491-201ENST00000384877 84 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 RN7SKP58-201ENST00000411010 305 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 MTATP6P18-201ENST00000417994 673 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.7□□□□□ -1.82
TRIM38O00635 NUP35P1-201ENST00000422734 947 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 AP000907.1-201ENST00000428428 510 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM38O00635 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.7□□□□□ -1.82
TRIM38O00635 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM38O00635 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM38O00635 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM38O00635 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.7□□□□□ -1.82
TRIM38O00635 Y_RNA.639-201ENST00000458981 102 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 RNA5SP310-201ENST00000459084 116 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 RPL37P6-201ENST00000460682 294 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 AC126389.1-201ENST00000477436 290 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 RPL32P34-201ENST00000486380 400 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 AL160314.1-201ENST00000490836 438 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 HSPD1P15-201ENST00000505573 1122 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 TTC39CP1-201ENST00000512513 755 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 RN7SKP18-201ENST00000516005 275 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 RNA5SP164-201ENST00000516533 110 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 RNU6-1282P-201ENST00000516735 96 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 Y_RNA.711-201ENST00000516993 102 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.7□□□□□ -1.82
TRIM38O00635 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM38O00635 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM38O00635 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM38O00635 AC107294.1-201ENST00000609524 467 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM38O00635 MIR6076-201ENST00000617521 113 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 AC090617.10-201ENST00000624308 134 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 AC119674.1-207ENST00000641355 633 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
TRIM38O00635 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM38O00635 AC007656.2-201ENST00000624902 4547 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 AL049641.1-201ENST00000441055 1948 ntBASIC3.7□□□□□ -1.82
TRIM38O00635 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM38O00635 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms