Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.93□□□□□ -1.94
O00370 AC087499.2-201ENST00000432861 149 ntBASIC2.93□□□□□ -1.94
O00370 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.93□□□□□ -1.94
O00370 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.93□□□□□ -1.94
O00370 AC009961.2-201ENST00000435771 251 ntBASIC2.93□□□□□ -1.94
O00370 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.93□□□□□ -1.94
O00370 KC877373.1-201ENST00000479066 408 ntBASIC2.93□□□□□ -1.94
O00370 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
O00370 AC103975.1-201ENST00000482506 483 ntBASIC2.93□□□□□ -1.94
O00370 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
O00370 RNA5SP367-201ENST00000516557 118 ntBASIC2.93□□□□□ -1.94
O00370 RNU6-430P-201ENST00000517078 107 ntBASIC2.93□□□□□ -1.94
O00370 NRON-201ENST00000517270 370 ntBASIC2.93□□□□□ -1.94
O00370 AC090136.1-201ENST00000520009 240 ntBASIC2.93□□□□□ -1.94
O00370 AC022616.3-201ENST00000523940 148 ntBASIC2.93□□□□□ -1.94
O00370 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.93□□□□□ -1.94
O00370 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.93□□□□□ -1.94
O00370 LARP7P3-201ENST00000579888 337 ntBASIC2.93□□□□□ -1.94
O00370 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.93□□□□□ -1.94
O00370 MIR3670-2-201ENST00000582974 65 ntBASIC2.93□□□□□ -1.94
O00370 MIR3605-201ENST00000583214 100 ntBASIC2.93□□□□□ -1.94
O00370 MIR3670-1-201ENST00000584160 65 ntBASIC2.93□□□□□ -1.94
O00370 MIR3670-3-201ENST00000584855 65 ntBASIC2.93□□□□□ -1.94
O00370 AC007619.2-201ENST00000605743 379 ntBASIC2.93□□□□□ -1.94
O00370 AC064807.4-201ENST00000607201 407 ntBASIC2.93□□□□□ -1.94
O00370 MIR3670-4-201ENST00000612260 65 ntBASIC2.93□□□□□ -1.94
O00370 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.93□□□□□ -1.94
O00370 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
O00370 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
O00370 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
O00370 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
O00370 AL049641.1-201ENST00000441055 1948 ntBASIC2.92□□□□□ -1.94
O00370 RNU6-288P-201ENST00000363690 104 ntBASIC2.92□□□□□ -1.94
O00370 Y_RNA.194-201ENST00000363985 102 ntBASIC2.92□□□□□ -1.94
O00370 RNU1-112P-201ENST00000364401 164 ntBASIC2.92□□□□□ -1.94
O00370 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.92□□□□□ -1.94
O00370 AL513331.1-201ENST00000411908 397 ntBASIC2.92□□□□□ -1.94
O00370 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.92□□□□□ -1.94
O00370 Z85995.1-201ENST00000415547 335 ntBASIC2.92□□□□□ -1.94
O00370 RPL7P10-201ENST00000417407 739 ntBASIC2.92□□□□□ -1.94
O00370 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.92□□□□□ -1.94
O00370 AC099548.1-201ENST00000421443 426 ntBASIC2.92□□□□□ -1.94
O00370 HMGB1P27-201ENST00000431429 603 ntBASIC2.92□□□□□ -1.94
O00370 VN1R108P-201ENST00000431580 830 ntBASIC2.92□□□□□ -1.94
O00370 RPS24P13-201ENST00000442520 397 ntBASIC2.92□□□□□ -1.94
O00370 NEFMP1-201ENST00000443423 1006 ntBASIC2.92□□□□□ -1.94
O00370 CBWD4P-201ENST00000445695 655 ntBASIC2.92□□□□□ -1.94
O00370 AC020550.1-201ENST00000447385 163 ntBASIC2.92□□□□□ -1.94
O00370 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.92□□□□□ -1.94
O00370 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.92□□□□□ -1.94
O00370 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
O00370 AL135752.1-201ENST00000479477 471 ntBASIC2.92□□□□□ -1.94
O00370 RN7SL432P-201ENST00000484057 298 ntBASIC2.92□□□□□ -1.94
O00370 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.92□□□□□ -1.94
O00370 RNU2-10P-201ENST00000516375 211 ntBASIC2.92□□□□□ -1.94
O00370 SNORA9.3-201ENST00000516383 129 ntBASIC2.92□□□□□ -1.94
O00370 RNU6-1282P-201ENST00000516735 96 ntBASIC2.92□□□□□ -1.94
O00370 AC100870.1-201ENST00000522035 505 ntBASIC2.92□□□□□ -1.94
O00370 AC004486.1-201ENST00000546846 233 ntBASIC2.92□□□□□ -1.94
O00370 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.92□□□□□ -1.94
O00370 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.92□□□□□ -1.94
O00370 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.92□□□□□ -1.94
O00370 AC103987.3-201ENST00000582071 292 ntBASIC2.92□□□□□ -1.94
O00370 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.92□□□□□ -1.94
O00370 NRBF2P1-201ENST00000587407 859 ntBASIC2.92□□□□□ -1.94
O00370 AC087683.1-201ENST00000591187 441 ntBASIC2.92□□□□□ -1.94
O00370 AC019159.1-201ENST00000605094 187 ntBASIC2.92□□□□□ -1.94
O00370 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.92□□□□□ -1.94
O00370 AC091834.1-201ENST00000614543 472 ntBASIC2.92□□□□□ -1.94
O00370 AC072046.2-201ENST00000618366 268 ntBASIC2.92□□□□□ -1.94
O00370 AC009509.4-201ENST00000619202 509 ntBASIC2.92□□□□□ -1.94
O00370 AC099842.1-201ENST00000619919 596 ntBASIC2.92□□□□□ -1.94
O00370 MIR6852-201ENST00000621699 66 ntBASIC2.92□□□□□ -1.94
O00370 FRG1KP-201ENST00000623592 341 ntBASIC2.92□□□□□ -1.94
O00370 AC007785.2-201ENST00000598627 1916 ntBASIC2.91□□□□□ -1.94
O00370 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
O00370 AC008669.1-201ENST00000565823 2178 ntBASIC2.91□□□□□ -1.94
O00370 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.91□□□□□ -1.94
O00370 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
O00370 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
O00370 RNU6-511P-201ENST00000363496 107 ntBASIC2.91□□□□□ -1.94
O00370 SNORA80A-201ENST00000363922 136 ntBASIC2.91□□□□□ -1.94
O00370 RNU6-1042P-201ENST00000384204 107 ntBASIC2.91□□□□□ -1.94
O00370 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
O00370 RPL23AP30-201ENST00000432419 501 ntBASIC2.91□□□□□ -1.94
O00370 AC112220.1-201ENST00000434628 355 ntBASIC2.91□□□□□ -1.94
O00370 RPS24P1-201ENST00000438550 371 ntBASIC2.91□□□□□ -1.94
O00370 AC105272.1-201ENST00000438604 198 ntBASIC2.91□□□□□ -1.94
O00370 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.91□□□□□ -1.94
O00370 MTND4P25-201ENST00000441039 533 ntBASIC2.91□□□□□ -1.94
O00370 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.91□□□□□ -1.94
O00370 MRPL50P4-201ENST00000446432 475 ntBASIC2.91□□□□□ -1.94
O00370 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.91□□□□□ -1.94
O00370 FABP5P13-201ENST00000452144 328 ntBASIC2.91□□□□□ -1.94
O00370 AP000705.1-201ENST00000454567 350 ntBASIC2.91□□□□□ -1.94
O00370 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.91□□□□□ -1.94
O00370 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.91□□□□□ -1.94
O00370 SNORD97-201ENST00000459187 142 ntBASIC2.91□□□□□ -1.94
O00370 MTCO2P29-201ENST00000465212 189 ntBASIC2.91□□□□□ -1.94
O00370 AC096576.1-201ENST00000489014 359 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms