Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.12□□□□□ -2.07
CDC7O00311 AC079804.2-201ENST00000490376 200 ntBASIC2.12□□□□□ -2.07
CDC7O00311 AC104685.1-201ENST00000502445 371 ntBASIC2.12□□□□□ -2.07
CDC7O00311 RPF2P2-201ENST00000504693 896 ntBASIC2.12□□□□□ -2.07
CDC7O00311 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.12□□□□□ -2.07
CDC7O00311 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.12□□□□□ -2.07
CDC7O00311 RNA5SP200-201ENST00000516360 103 ntBASIC2.12□□□□□ -2.07
CDC7O00311 DEFB108A-201ENST00000530110 222 ntBASIC2.12□□□□□ -2.07
CDC7O00311 AC068587.4-201ENST00000533893 186 ntBASIC2.12□□□□□ -2.07
CDC7O00311 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.12□□□□□ -2.07
CDC7O00311 AC009063.1-201ENST00000563342 702 ntBASIC2.12□□□□□ -2.07
CDC7O00311 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.12□□□□□ -2.07
CDC7O00311 AC023824.2-201ENST00000566185 400 ntBASIC2.12□□□□□ -2.07
CDC7O00311 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.12□□□□□ -2.07
CDC7O00311 MIR3199-1-201ENST00000582434 88 ntBASIC2.12□□□□□ -2.07
CDC7O00311 MIR5002-201ENST00000584713 97 ntBASIC2.12□□□□□ -2.07
CDC7O00311 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.12□□□□□ -2.07
CDC7O00311 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.12□□□□□ -2.07
CDC7O00311 AC008121.1-201ENST00000603244 268 ntBASIC2.12□□□□□ -2.07
CDC7O00311 AC091965.4-201ENST00000607691 587 ntBASIC2.12□□□□□ -2.07
CDC7O00311 AC103710.1-201ENST00000610003 901 ntBASIC2.12□□□□□ -2.07
CDC7O00311 DUSP12P1-201ENST00000612874 516 ntBASIC2.12□□□□□ -2.07
CDC7O00311 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.12□□□□□ -2.07
CDC7O00311 AC079416.3-201ENST00000624479 549 ntBASIC2.12□□□□□ -2.07
CDC7O00311 MIR203B-201ENST00000636080 86 ntBASIC2.12□□□□□ -2.07
CDC7O00311 MIR3199-2-201ENST00000636243 86 ntBASIC2.12□□□□□ -2.07
CDC7O00311 ZNF658B-202ENST00000615961 3375 ntBASIC2.12□□□□□ -2.07
CDC7O00311 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.11□□□□□ -2.07
CDC7O00311 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.11□□□□□ -2.07
CDC7O00311 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.11□□□□□ -2.07
CDC7O00311 AC010329.5-201ENST00000623497 2174 ntBASIC2.11□□□□□ -2.07
CDC7O00311 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDC7O00311 OR56A5-201ENST00000340110 738 ntBASIC2.11□□□□□ -2.07
CDC7O00311 RNU6-931P-201ENST00000363850 107 ntBASIC2.11□□□□□ -2.07
CDC7O00311 RNA5SP88-201ENST00000365560 109 ntBASIC2.11□□□□□ -2.07
CDC7O00311 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.11□□□□□ -2.07
CDC7O00311 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.11□□□□□ -2.07
CDC7O00311 RNU6-1083P-201ENST00000384022 107 ntBASIC2.11□□□□□ -2.07
CDC7O00311 SNORA6-201ENST00000384033 151 ntBASIC2.11□□□□□ -2.07
CDC7O00311 SNORA51.11-201ENST00000384442 131 ntBASIC2.11□□□□□ -2.07
CDC7O00311 SNORA3.2-201ENST00000408221 125 ntBASIC2.11□□□□□ -2.07
CDC7O00311 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.11□□□□□ -2.07
CDC7O00311 AC005005.2-201ENST00000420779 380 ntBASIC2.11□□□□□ -2.07
CDC7O00311 AL109913.1-201ENST00000421173 514 ntBASIC2.11□□□□□ -2.07
CDC7O00311 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.11□□□□□ -2.07
CDC7O00311 AL353729.1-201ENST00000425044 720 ntBASIC2.11□□□□□ -2.07
CDC7O00311 ISCA1P1-201ENST00000426679 387 ntBASIC2.11□□□□□ -2.07
CDC7O00311 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.11□□□□□ -2.07
CDC7O00311 WARS2P1-201ENST00000429678 537 ntBASIC2.11□□□□□ -2.07
CDC7O00311 HSFY7P-201ENST00000432672 318 ntBASIC2.11□□□□□ -2.07
CDC7O00311 HSFY8P-201ENST00000437934 318 ntBASIC2.11□□□□□ -2.07
CDC7O00311 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.11□□□□□ -2.07
CDC7O00311 HSFY5P-201ENST00000453726 309 ntBASIC2.11□□□□□ -2.07
CDC7O00311 RPL37P6-201ENST00000460682 294 ntBASIC2.11□□□□□ -2.07
CDC7O00311 TRBV1-201ENST00000476502 284 ntBASIC2.11□□□□□ -2.07
CDC7O00311 GTF2IP9-201ENST00000502460 301 ntBASIC2.11□□□□□ -2.07
CDC7O00311 HSPE1P23-201ENST00000509838 286 ntBASIC2.11□□□□□ -2.07
CDC7O00311 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.11□□□□□ -2.07
CDC7O00311 RNU6-237P-201ENST00000515985 71 ntBASIC2.11□□□□□ -2.07
CDC7O00311 SNORA31.3-201ENST00000516029 96 ntBASIC2.11□□□□□ -2.07
CDC7O00311 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.11□□□□□ -2.07
CDC7O00311 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.11□□□□□ -2.07
CDC7O00311 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.11□□□□□ -2.07
CDC7O00311 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.11□□□□□ -2.07
CDC7O00311 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.11□□□□□ -2.07
CDC7O00311 NACAP3-201ENST00000552100 481 ntBASIC2.11□□□□□ -2.07
CDC7O00311 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.11□□□□□ -2.07
CDC7O00311 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.11□□□□□ -2.07
CDC7O00311 AC007151.1-201ENST00000572774 483 ntBASIC2.11□□□□□ -2.07
CDC7O00311 AC005261.5-201ENST00000596280 355 ntBASIC2.11□□□□□ -2.07
CDC7O00311 AL391813.1-201ENST00000603098 260 ntBASIC2.11□□□□□ -2.07
CDC7O00311 BNIP3P10-201ENST00000605360 577 ntBASIC2.11□□□□□ -2.07
CDC7O00311 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDC7O00311 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.11□□□□□ -2.07
CDC7O00311 CU459211.1-201ENST00000635667 749 ntBASIC2.11□□□□□ -2.07
CDC7O00311 MTND4P27-201ENST00000450813 1354 ntBASIC2.1□□□□□ -2.07
CDC7O00311 MTND4P16-201ENST00000466108 1367 ntBASIC2.1□□□□□ -2.07
CDC7O00311 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
CDC7O00311 CKAP2P1-201ENST00000555477 2049 ntBASIC2.1□□□□□ -2.07
CDC7O00311 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDC7O00311 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDC7O00311 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
CDC7O00311 FAM133CP-201ENST00000332869 704 ntBASIC2.1□□□□□ -2.07
CDC7O00311 RNU6-1284P-201ENST00000363701 100 ntBASIC2.1□□□□□ -2.07
CDC7O00311 RNU4-52P-201ENST00000384209 138 ntBASIC2.1□□□□□ -2.07
CDC7O00311 RNU6-658P-201ENST00000384606 106 ntBASIC2.1□□□□□ -2.07
CDC7O00311 AL021407.1-201ENST00000404531 386 ntBASIC2.1□□□□□ -2.07
CDC7O00311 AL135786.1-201ENST00000415892 214 ntBASIC2.1□□□□□ -2.07
CDC7O00311 MTCO2P21-201ENST00000419780 677 ntBASIC2.1□□□□□ -2.07
CDC7O00311 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.1□□□□□ -2.07
CDC7O00311 AC104651.1-201ENST00000427559 735 ntBASIC2.1□□□□□ -2.07
CDC7O00311 MTND1P32-201ENST00000433043 938 ntBASIC2.1□□□□□ -2.07
CDC7O00311 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.1□□□□□ -2.07
CDC7O00311 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.1□□□□□ -2.07
CDC7O00311 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.1□□□□□ -2.07
CDC7O00311 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.1□□□□□ -2.07
CDC7O00311 DUXAP8-207ENST00000456786 622 ntBASIC2.1□□□□□ -2.07
CDC7O00311 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.1□□□□□ -2.07
CDC7O00311 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.1□□□□□ -2.07
CDC7O00311 AC023141.11-201ENST00000508864 202 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms