Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.29□□□□□ -1.88
TAF4O00268 AL591212.2-201ENST00000433923 257 ntBASIC3.29□□□□□ -1.88
TAF4O00268 HMGB3P12-201ENST00000438745 556 ntBASIC3.29□□□□□ -1.88
TAF4O00268 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.29□□□□□ -1.88
TAF4O00268 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.29□□□□□ -1.88
TAF4O00268 AC021205.2-201ENST00000480069 347 ntBASIC3.29□□□□□ -1.88
TAF4O00268 RPS15AP34-201ENST00000487776 387 ntBASIC3.29□□□□□ -1.88
TAF4O00268 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.29□□□□□ -1.88
TAF4O00268 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.29□□□□□ -1.88
TAF4O00268 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.29□□□□□ -1.88
TAF4O00268 RNA5SP356-201ENST00000515972 94 ntBASIC3.29□□□□□ -1.88
TAF4O00268 Y_RNA.689-201ENST00000516589 107 ntBASIC3.29□□□□□ -1.88
TAF4O00268 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.29□□□□□ -1.88
TAF4O00268 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.29□□□□□ -1.88
TAF4O00268 HMGB1P6-201ENST00000569046 646 ntBASIC3.29□□□□□ -1.88
TAF4O00268 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.29□□□□□ -1.88
TAF4O00268 BNIP3P9-201ENST00000603714 553 ntBASIC3.29□□□□□ -1.88
TAF4O00268 NUTF2P8-201ENST00000604593 363 ntBASIC3.29□□□□□ -1.88
TAF4O00268 AC004492.1-201ENST00000607036 742 ntBASIC3.29□□□□□ -1.88
TAF4O00268 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.29□□□□□ -1.88
TAF4O00268 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
TAF4O00268 AC025034.2-201ENST00000623264 286 ntBASIC3.29□□□□□ -1.88
TAF4O00268 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.29□□□□□ -1.88
TAF4O00268 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.29□□□□□ -1.88
TAF4O00268 AC091564.4-201ENST00000533934 2194 ntBASIC3.29□□□□□ -1.88
TAF4O00268 AL137003.2-201ENST00000606924 2538 ntBASIC3.29□□□□□ -1.88
TAF4O00268 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
TAF4O00268 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
TAF4O00268 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TAF4O00268 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
TAF4O00268 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TAF4O00268 RNU6-1287P-201ENST00000362914 107 ntBASIC3.28□□□□□ -1.88
TAF4O00268 RNU6-512P-201ENST00000364438 103 ntBASIC3.28□□□□□ -1.88
TAF4O00268 RNU6-1035P-201ENST00000384477 107 ntBASIC3.28□□□□□ -1.88
TAF4O00268 RNU6-1060P-201ENST00000384664 107 ntBASIC3.28□□□□□ -1.88
TAF4O00268 MIR504-201ENST00000385065 83 ntBASIC3.28□□□□□ -1.88
TAF4O00268 FCF1P9-201ENST00000412546 282 ntBASIC3.28□□□□□ -1.88
TAF4O00268 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.28□□□□□ -1.88
TAF4O00268 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.28□□□□□ -1.88
TAF4O00268 AL139281.1-201ENST00000422120 335 ntBASIC3.28□□□□□ -1.88
TAF4O00268 AC012498.1-201ENST00000424037 437 ntBASIC3.28□□□□□ -1.88
TAF4O00268 RPL23AP82-202ENST00000427528 469 ntBASIC3.28□□□□□ -1.88
TAF4O00268 MTATP6P16-201ENST00000434543 526 ntBASIC3.28□□□□□ -1.88
TAF4O00268 RPL36AP6-201ENST00000435770 321 ntBASIC3.28□□□□□ -1.88
TAF4O00268 RNU7-182P-201ENST00000459009 62 ntBASIC3.28□□□□□ -1.88
TAF4O00268 RNU6-928P-201ENST00000516876 104 ntBASIC3.28□□□□□ -1.88
TAF4O00268 AP001893.2-201ENST00000526949 202 ntBASIC3.28□□□□□ -1.88
TAF4O00268 RANP3-201ENST00000530970 276 ntBASIC3.28□□□□□ -1.88
TAF4O00268 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.28□□□□□ -1.88
TAF4O00268 AC091544.4-201ENST00000555268 342 ntBASIC3.28□□□□□ -1.88
TAF4O00268 AC136619.2-201ENST00000563361 631 ntBASIC3.28□□□□□ -1.88
TAF4O00268 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.28□□□□□ -1.88
TAF4O00268 AL365204.3-201ENST00000612448 685 ntBASIC3.28□□□□□ -1.88
TAF4O00268 AC034102.8-201ENST00000615146 484 ntBASIC3.28□□□□□ -1.88
TAF4O00268 ATP5A1P2-202ENST00000616464 443 ntBASIC3.28□□□□□ -1.88
TAF4O00268 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.28□□□□□ -1.88
TAF4O00268 MIR7111-201ENST00000619751 72 ntBASIC3.28□□□□□ -1.88
TAF4O00268 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.28□□□□□ -1.88
TAF4O00268 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TAF4O00268 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.28□□□□□ -1.88
TAF4O00268 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.28□□□□□ -1.88
TAF4O00268 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TAF4O00268 AC010680.1-201ENST00000590024 3590 ntBASIC3.28□□□□□ -1.88
TAF4O00268 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TAF4O00268 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.27□□□□□ -1.89
TAF4O00268 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TAF4O00268 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
TAF4O00268 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.27□□□□□ -1.89
TAF4O00268 RNU6-1167P-201ENST00000363227 94 ntBASIC3.27□□□□□ -1.89
TAF4O00268 Y_RNA.367-201ENST00000365544 101 ntBASIC3.27□□□□□ -1.89
TAF4O00268 DYNLT3P1-201ENST00000378574 347 ntBASIC3.27□□□□□ -1.89
TAF4O00268 RNU6-1103P-201ENST00000384150 107 ntBASIC3.27□□□□□ -1.89
TAF4O00268 Y_RNA.481-201ENST00000384373 102 ntBASIC3.27□□□□□ -1.89
TAF4O00268 RNU6-817P-201ENST00000391083 104 ntBASIC3.27□□□□□ -1.89
TAF4O00268 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TAF4O00268 HMGB3P20-201ENST00000417997 600 ntBASIC3.27□□□□□ -1.89
TAF4O00268 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.27□□□□□ -1.89
TAF4O00268 AL353678.1-201ENST00000422735 741 ntBASIC3.27□□□□□ -1.89
TAF4O00268 RPL35AP12-201ENST00000425362 338 ntBASIC3.27□□□□□ -1.89
TAF4O00268 TIMM9P3-201ENST00000428659 274 ntBASIC3.27□□□□□ -1.89
TAF4O00268 GPM6BP2-201ENST00000432046 144 ntBASIC3.27□□□□□ -1.89
TAF4O00268 NDUFB1P1-201ENST00000435191 180 ntBASIC3.27□□□□□ -1.89
TAF4O00268 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.27□□□□□ -1.89
TAF4O00268 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.27□□□□□ -1.89
TAF4O00268 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TAF4O00268 GPM6BP1-201ENST00000446387 144 ntBASIC3.27□□□□□ -1.89
TAF4O00268 RPL23AP20-201ENST00000447965 421 ntBASIC3.27□□□□□ -1.89
TAF4O00268 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.27□□□□□ -1.89
TAF4O00268 RNU7-63P-201ENST00000459054 62 ntBASIC3.27□□□□□ -1.89
TAF4O00268 TRBV12-1-201ENST00000479785 344 ntBASIC3.27□□□□□ -1.89
TAF4O00268 AC110794.1-201ENST00000505816 425 ntBASIC3.27□□□□□ -1.89
TAF4O00268 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.27□□□□□ -1.89
TAF4O00268 RNA5SP503-201ENST00000517047 117 ntBASIC3.27□□□□□ -1.89
TAF4O00268 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.27□□□□□ -1.89
TAF4O00268 AP006245.1-201ENST00000522549 120 ntBASIC3.27□□□□□ -1.89
TAF4O00268 AL359212.1-201ENST00000556608 614 ntBASIC3.27□□□□□ -1.89
TAF4O00268 ZNF519P2-201ENST00000557032 169 ntBASIC3.27□□□□□ -1.89
TAF4O00268 TRAV28-201ENST00000557548 323 ntBASIC3.27□□□□□ -1.89
TAF4O00268 AC067852.3-201ENST00000589177 561 ntBASIC3.27□□□□□ -1.89
TAF4O00268 AC174048.1-201ENST00000603389 144 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms