Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 FAM103A2P-201ENST00000444122 354 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 COX6CP18-201ENST00000448769 222 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 SNORD116-28-201ENST00000516123 91 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 AP006587.4-201ENST00000526053 529 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 AP003033.1-201ENST00000527244 415 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 AC106734.1-201ENST00000568646 663 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 AC090079.2-201ENST00000575289 768 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 SNORA77B-201ENST00000578179 125 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 AC097468.3-201ENST00000607956 456 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 AC004067.1-201ENST00000608733 700 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 OR5T3-201ENST00000303059 1023 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 SNORA71.3-201ENST00000362582 128 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 RNU6-26P-201ENST00000383985 107 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 SNORA29-201ENST00000384183 140 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 MIR1262-201ENST00000408276 93 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 RNU6ATAC34P-201ENST00000408879 121 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 RN7SKP223-201ENST00000410582 62 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 AC139712.2-201ENST00000424302 339 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 CR848007.2-201ENST00000424918 787 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 AL451062.2-201ENST00000427515 271 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 AC027119.1-201ENST00000440877 241 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 COX7A2P2-201ENST00000505291 250 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 RNU6-667P-201ENST00000517186 102 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 SNORA70.24-201ENST00000517233 118 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 AP005660.1-201ENST00000522972 293 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 MIR1254-2-201ENST00000579553 63 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 MIR4653-201ENST00000585107 83 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 VN1R88P-201ENST00000596787 292 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 CYP2C61P-201ENST00000604072 290 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 AC073413.2-201ENST00000604332 360 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 MIR6748-201ENST00000610433 71 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 AC024257.5-201ENST00000612739 531 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 MFSD8-213ENST00000641134 1327 ntBASIC0.54□□□□□ -2.32
CHKB-CPT1BH3BT56 RNU5E-1-201ENST00000362477 120 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 RNU1-36P-201ENST00000365130 165 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 POLR2J4-204ENST00000418424 324 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 USP9YP26-201ENST00000421008 661 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 USP9YP18-201ENST00000425912 695 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 UBE2V2P3-201ENST00000433562 437 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AL831737.1-201ENST00000441288 271 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 USP9YP17-201ENST00000444617 696 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 RPL31P3-201ENST00000458430 332 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 FAM133DP-201ENST00000464802 691 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AC114982.1-201ENST00000469402 321 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AP001025.1-201ENST00000486139 332 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 MTCYBP16-201ENST00000509187 1129 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AC112198.4-201ENST00000515450 351 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AC025918.2-201ENST00000558683 763 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 MIR3167-201ENST00000579623 85 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AC007179.3-201ENST00000604976 235 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AC069304.2-201ENST00000605154 435 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AL160281.1-201ENST00000605307 311 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AC242628.1-201ENST00000606810 391 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AC008121.3-201ENST00000618726 433 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AL109620.1-201ENST00000618738 1197 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 AC104820.1-201ENST00000624183 307 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 SEC63P2-201ENST00000503863 1939 ntBASIC0.53□□□□□ -2.32
CHKB-CPT1BH3BT56 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.53□□□□□ -2.33
CHKB-CPT1BH3BT56 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.53□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.53□□□□□ -2.33
CHKB-CPT1BH3BT56 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC0.53□□□□□ -2.33
CHKB-CPT1BH3BT56 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 HAUS6P2-201ENST00000433254 2404 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 RNU1-58P-201ENST00000362413 163 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 Y_RNA.126-201ENST00000363382 111 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 RNU6-1164P-201ENST00000364428 107 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 SNORD1A-201ENST00000364968 72 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 RNU6-878P-201ENST00000384578 110 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 Z86062.1-201ENST00000406773 777 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 AC127391.1-201ENST00000411737 98 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 PIGFP2-201ENST00000421400 651 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 AL590233.1-201ENST00000430017 456 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms