Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 DEFB108F-201ENST00000344638 222 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 RNU4-1-201ENST00000363925 141 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 RNU1-39P-201ENST00000383897 165 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 MT-TH-201ENST00000387441 69 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 RNA5SP338-201ENST00000410495 85 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC090960.1-201ENST00000421072 306 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC092427.1-202ENST00000430569 476 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 MTND1P28-201ENST00000435623 950 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 UBE2V1P13-201ENST00000436983 439 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 PGBD4P3-201ENST00000440731 581 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 COX6CP12-201ENST00000446748 202 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC234775.1-201ENST00000454247 670 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 RPL9P6-201ENST00000492764 598 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 RNU6-798P-201ENST00000516912 103 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AP002748.2-201ENST00000528671 348 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 OR4R1P-201ENST00000529879 463 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 MIR3118-1-201ENST00000581787 76 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 MIR548AB-201ENST00000584917 84 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 TUG1_2.1-201ENST00000614234 87 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC009268.2-201ENST00000621925 457 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 MIR6132-201ENST00000622083 109 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC008443.7-201ENST00000622195 246 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL603839.4-201ENST00000624658 1005 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC019226.1-201ENST00000625666 515 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC093591.3-201ENST00000634516 308 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 MTND4P4-201ENST00000439033 1366 ntBASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TMX2-CTNND1H3BSU7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNU6-809P-201ENST00000384461 107 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNY3P9-201ENST00000384727 106 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 Y_RNA.608-201ENST00000410647 95 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNU6-516P-201ENST00000411381 104 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL353777.1-201ENST00000425552 326 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC244035.1-201ENST00000430042 390 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 MTATP6P30-201ENST00000443540 664 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 TAF9P1-201ENST00000445421 515 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 TAF9P2-201ENST00000454958 515 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 AP000797.1-201ENST00000478870 387 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 GZMAP1-201ENST00000503054 631 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC116347.2-201ENST00000514912 523 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC107934.1-201ENST00000522215 217 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 MTCYBP20-201ENST00000524239 1129 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 SUB1P1-201ENST00000524415 382 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL356432.3-201ENST00000568952 465 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 MIR5194-201ENST00000582634 120 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC010620.1-201ENST00000601088 1102 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 AP001981.2-201ENST00000603241 418 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 Z94722.1-201ENST00000604328 474 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC245517.5-201ENST00000611529 162 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 PISRT1-201ENST00000626175 531 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 MIR219B-201ENST00000637023 88 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.21□□□□□ -2.06
TMX2-CTNND1H3BSU7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms