Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC130324.3-201ENST00000614165 542 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SMKR1H3BMG3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.83□□□□□ -2.12
SMKR1H3BMG3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 MIR422A-201ENST00000362286 90 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 RNA5SP374-201ENST00000362939 125 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 RNA5SP267-201ENST00000364893 126 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 SNORA62.3-201ENST00000365110 153 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 RNU6-946P-201ENST00000383878 107 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 RNU6-166P-201ENST00000384371 107 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 RNU6-809P-201ENST00000384461 107 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 RNU6-1025P-201ENST00000410629 104 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 RNA5SP270-201ENST00000411361 118 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 EEF1A1P41-201ENST00000414667 207 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 RPLP0P7-201ENST00000416050 667 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AC091390.1-201ENST00000433904 331 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AL513328.1-201ENST00000446460 224 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 SSXP1-201ENST00000453640 473 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 CYP2C59P-201ENST00000457790 269 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 CKS1BP2-201ENST00000497342 240 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AL157871.3-201ENST00000557231 293 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AC007448.1-201ENST00000582714 234 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AL355297.2-201ENST00000604792 129 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AL109618.2-201ENST00000605527 211 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 YPEL5P2-201ENST00000605553 359 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AL355816.2-201ENST00000610049 647 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 AC091953.2-201ENST00000623979 160 ntBASIC1.82□□□□□ -2.12
SMKR1H3BMG3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.82□□□□□ -2.12
SMKR1H3BMG3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 AC005336.3-201ENST00000623833 2679 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 OR56A5-201ENST00000340110 738 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 MIR21-201ENST00000362134 72 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 Y_RNA.33-201ENST00000362591 102 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 RNU1-72P-201ENST00000362976 153 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 RNU6-525P-201ENST00000363685 104 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 RNU1-91P-201ENST00000364746 163 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 SNORA6-201ENST00000384033 151 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 AL355497.1-201ENST00000406262 551 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 RNA5SP21-201ENST00000410917 96 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 NUP35P1-201ENST00000422734 947 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 PGBD4P3-201ENST00000440731 581 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 AC118469.1-201ENST00000442943 488 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 H2AFZP6-201ENST00000444403 394 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 MTND1P12-201ENST00000455231 147 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 MTND4P2-201ENST00000507767 1203 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 AC112673.1-201ENST00000513168 575 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 RNU6-678P-201ENST00000516832 109 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 MTND4LP18-201ENST00000526864 291 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 AC012435.1-202ENST00000568772 240 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 MIR5694-201ENST00000581190 76 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 VN1R90P-201ENST00000595717 726 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 AC245884.10-201ENST00000597355 337 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 MIR15A-201ENST00000607334 83 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.81□□□□□ -2.12
SMKR1H3BMG3 AC080100.1-201ENST00000624239 5356 ntBASIC1.81□□□□□ -2.12
SMKR1H3BMG3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.8□□□□□ -2.12
SMKR1H3BMG3 AL596028.1-201ENST00000326971 197 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms