Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 FAM106DP-201ENST00000586416 501 ntBASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 AP003973.1-201ENST00000604639 691 ntBASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 AC083806.3-201ENST00000614016 455 ntBASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 AL512506.2-201ENST00000624472 458 ntBASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
CPSF4LA6NMK7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 RNU6-730P-201ENST00000383954 104 ntBASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 MIR520E-201ENST00000384867 87 ntBASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 AC023141.4-201ENST00000412031 328 ntBASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 AC009310.1-201ENST00000414414 451 ntBASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 EIF4EP2-201ENST00000422816 654 ntBASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 USP9YP34-201ENST00000453983 808 ntBASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 RPL9P9-202ENST00000466501 579 ntBASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 AL049714.1-201ENST00000466686 347 ntBASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 AC114786.4-201ENST00000508771 728 ntBASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 AC114797.1-201ENST00000514003 728 ntBASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 AC093677.1-201ENST00000514414 678 ntBASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 AC105245.1-201ENST00000581934 244 ntBASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 AL355802.3-201ENST00000607571 545 ntBASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 AC008163.1-202ENST00000636004 2889 ntBASIC0.52□□□□□ -2.33
CPSF4LA6NMK7 HSBP1P2-201ENST00000299671 229 ntBASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 MIR337-201ENST00000362281 93 ntBASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 RNU6-750P-201ENST00000390946 107 ntBASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 TAAR7P-201ENST00000436141 242 ntBASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 AL161651.1-201ENST00000440882 223 ntBASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 DDX3P2-201ENST00000446138 111 ntBASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 RNA5SP57-201ENST00000459463 123 ntBASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 OR9N1P-202ENST00000494289 481 ntBASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 AC025857.1-201ENST00000525252 377 ntBASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 NIFKP6-201ENST00000598115 845 ntBASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 AC008443.7-201ENST00000622195 246 ntBASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 AC083865.1-201ENST00000636634 831 ntBASIC0.51□□□□□ -2.33
CPSF4LA6NMK7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 SNORA70.7-201ENST00000384159 133 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 MIR325-201ENST00000385260 98 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 U6atac.2-201ENST00000408644 118 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 RNU2-49P-201ENST00000410666 184 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 ZYG11AP1-201ENST00000430329 837 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 AL512844.2-201ENST00000433990 593 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 AL354941.1-201ENST00000438600 464 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 AC109927.2-201ENST00000506416 303 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 RNU6-1095P-201ENST00000516148 108 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 RNU6-1282P-201ENST00000516735 96 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 AP003034.1-201ENST00000534621 422 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 AC005668.1-201ENST00000571142 476 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 AC010615.3-201ENST00000597319 394 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 AC136443.5-201ENST00000603741 370 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 AL138963.2-201ENST00000605137 226 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 AC073968.1-201ENST00000618594 637 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 AC040168.1-201ENST00000623594 991 ntBASIC0.5□□□□□ -2.33
CPSF4LA6NMK7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 NACAP2-201ENST00000318548 624 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 MIR100-201ENST00000385259 80 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 SNORA40.19-201ENST00000390846 128 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 RNU1-78P-201ENST00000391248 165 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 ATP5F1P6-201ENST00000402768 767 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 UBE2V2P3-201ENST00000433562 437 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 RPS15AP5-201ENST00000436276 388 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 AC009238.1-201ENST00000442165 424 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 AC009237.6-201ENST00000446969 424 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 AC104164.3-201ENST00000467363 1258 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 AL133373.1-201ENST00000497098 94 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 RNU7-40P-201ENST00000516397 64 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 AC067904.2-201ENST00000517322 1283 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 AC004492.1-201ENST00000607036 742 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 AC009233.1-201ENST00000616477 371 ntBASIC0.49□□□□□ -2.33
CPSF4LA6NMK7 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms