Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.27□□□□□ -2.37
LINC01549A6NIU2 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.27□□□□□ -2.37
LINC01549A6NIU2 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.27□□□□□ -2.37
LINC01549A6NIU2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.26□□□□□ -2.37
LINC01549A6NIU2 MIR373-201ENST00000362273 69 ntBASIC0.26□□□□□ -2.37
LINC01549A6NIU2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
LINC01549A6NIU2 RNA5SP213-201ENST00000391031 106 ntBASIC0.26□□□□□ -2.37
LINC01549A6NIU2 MIR1283-2-201ENST00000408621 87 ntBASIC0.26□□□□□ -2.37
LINC01549A6NIU2 RNU2-63P-201ENST00000410792 194 ntBASIC0.26□□□□□ -2.37
LINC01549A6NIU2 PNRC2P1-201ENST00000423940 420 ntBASIC0.26□□□□□ -2.37
LINC01549A6NIU2 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.26□□□□□ -2.37
LINC01549A6NIU2 C1DP3-201ENST00000455013 423 ntBASIC0.26□□□□□ -2.37
LINC01549A6NIU2 AC104689.1-201ENST00000473356 768 ntBASIC0.26□□□□□ -2.37
LINC01549A6NIU2 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.26□□□□□ -2.37
LINC01549A6NIU2 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
LINC01549A6NIU2 RPS27AP10-201ENST00000496103 208 ntBASIC0.26□□□□□ -2.37
LINC01549A6NIU2 RNF138P1-201ENST00000502765 546 ntBASIC0.26□□□□□ -2.37
LINC01549A6NIU2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.26□□□□□ -2.37
LINC01549A6NIU2 RNU6-197P-201ENST00000516680 100 ntBASIC0.26□□□□□ -2.37
LINC01549A6NIU2 RNU6-798P-201ENST00000516912 103 ntBASIC0.26□□□□□ -2.37
LINC01549A6NIU2 HAUS1P3-201ENST00000523909 662 ntBASIC0.26□□□□□ -2.37
LINC01549A6NIU2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.26□□□□□ -2.37
LINC01549A6NIU2 TRAV11-201ENST00000539512 339 ntBASIC0.26□□□□□ -2.37
LINC01549A6NIU2 MIR3945-201ENST00000581853 98 ntBASIC0.26□□□□□ -2.37
LINC01549A6NIU2 AL353997.5-201ENST00000618886 171 ntBASIC0.26□□□□□ -2.37
LINC01549A6NIU2 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
LINC01549A6NIU2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.26□□□□□ -2.37
LINC01549A6NIU2 AL442644.1-201ENST00000454390 3105 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.25□□□□□ -2.37
LINC01549A6NIU2 RBBP8P1-201ENST00000449447 1844 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 MTND5P11-201ENST00000511037 1812 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 MTND4P31-201ENST00000425607 1343 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 RNA5SP347-201ENST00000362445 119 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 RNU6-17P-201ENST00000384245 107 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 RNU6-18P-201ENST00000384527 107 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 MIR608-201ENST00000384820 100 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 AL031577.2-201ENST00000404133 280 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.25□□□□□ -2.37
LINC01549A6NIU2 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.25□□□□□ -2.37
LINC01549A6NIU2 AC092628.1-201ENST00000436250 252 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 MTND4P6-201ENST00000438297 472 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.25□□□□□ -2.37
LINC01549A6NIU2 AC114786.4-201ENST00000508771 728 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.25□□□□□ -2.37
LINC01549A6NIU2 AC114797.1-201ENST00000514003 728 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 DEFB108E-201ENST00000524692 240 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.25□□□□□ -2.37
LINC01549A6NIU2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.25□□□□□ -2.37
LINC01549A6NIU2 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.25□□□□□ -2.37
LINC01549A6NIU2 DUXAP1-201ENST00000556632 463 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.25□□□□□ -2.37
LINC01549A6NIU2 AC109446.2-201ENST00000567872 497 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.25□□□□□ -2.37
LINC01549A6NIU2 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.25□□□□□ -2.37
LINC01549A6NIU2 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.25□□□□□ -2.37
LINC01549A6NIU2 AC027335.2-201ENST00000624030 375 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 OR5H6-203ENST00000642105 978 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 AC009541.1-201ENST00000438279 2662 ntBASIC0.25□□□□□ -2.37
LINC01549A6NIU2 RNU6-482P-201ENST00000391068 107 ntBASIC0.24□□□□□ -2.37
LINC01549A6NIU2 DSTNP4-201ENST00000399472 474 ntBASIC0.24□□□□□ -2.37
LINC01549A6NIU2 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.24□□□□□ -2.37
LINC01549A6NIU2 AL121890.1-201ENST00000435457 205 ntBASIC0.24□□□□□ -2.37
LINC01549A6NIU2 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.24□□□□□ -2.37
LINC01549A6NIU2 AC010095.1-201ENST00000443543 144 ntBASIC0.24□□□□□ -2.37
LINC01549A6NIU2 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.24□□□□□ -2.37
LINC01549A6NIU2 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.24□□□□□ -2.37
LINC01549A6NIU2 snoU13.23-201ENST00000458863 104 ntBASIC0.24□□□□□ -2.37
LINC01549A6NIU2 AC147055.4-201ENST00000504399 745 ntBASIC0.24□□□□□ -2.37
LINC01549A6NIU2 SNORA31.6-201ENST00000516241 130 ntBASIC0.24□□□□□ -2.37
LINC01549A6NIU2 RNA5SP121-201ENST00000516537 101 ntBASIC0.24□□□□□ -2.37
LINC01549A6NIU2 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.24□□□□□ -2.37
LINC01549A6NIU2 AP000907.2-201ENST00000530827 353 ntBASIC0.24□□□□□ -2.37
LINC01549A6NIU2 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.24□□□□□ -2.37
LINC01549A6NIU2 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.24□□□□□ -2.37
LINC01549A6NIU2 VN1R80P-201ENST00000597126 338 ntBASIC0.24□□□□□ -2.37
LINC01549A6NIU2 AC009974.1-201ENST00000608881 455 ntBASIC0.24□□□□□ -2.37
LINC01549A6NIU2 AL589743.7-201ENST00000612637 233 ntBASIC0.24□□□□□ -2.37
LINC01549A6NIU2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.24□□□□□ -2.37
LINC01549A6NIU2 AC009950.2-201ENST00000636548 183 ntBASIC0.24□□□□□ -2.37
LINC01549A6NIU2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
LINC01549A6NIU2 OR5T3-201ENST00000303059 1023 ntBASIC0.23□□□□□ -2.37
LINC01549A6NIU2 RNU6-942P-201ENST00000363002 107 ntBASIC0.23□□□□□ -2.37
LINC01549A6NIU2 RNU6-750P-201ENST00000390946 107 ntBASIC0.23□□□□□ -2.37
LINC01549A6NIU2 KATNBL1P3-201ENST00000443475 909 ntBASIC0.23□□□□□ -2.37
LINC01549A6NIU2 AC108210.2-201ENST00000503681 201 ntBASIC0.23□□□□□ -2.37
LINC01549A6NIU2 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.23□□□□□ -2.37
LINC01549A6NIU2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.23□□□□□ -2.37
LINC01549A6NIU2 YWHAEP4-201ENST00000505390 198 ntBASIC0.23□□□□□ -2.37
LINC01549A6NIU2 MTCYBP16-201ENST00000509187 1129 ntBASIC0.23□□□□□ -2.37
LINC01549A6NIU2 AC098591.2-201ENST00000510152 315 ntBASIC0.23□□□□□ -2.37
LINC01549A6NIU2 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.23□□□□□ -2.37
LINC01549A6NIU2 AC008837.2-201ENST00000513076 418 ntBASIC0.23□□□□□ -2.37
LINC01549A6NIU2 RNU4-57P-201ENST00000515980 135 ntBASIC0.23□□□□□ -2.37
LINC01549A6NIU2 RNU4-54P-201ENST00000516428 129 ntBASIC0.23□□□□□ -2.37
LINC01549A6NIU2 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.23□□□□□ -2.37
LINC01549A6NIU2 AC026271.5-201ENST00000577873 130 ntBASIC0.23□□□□□ -2.37
LINC01549A6NIU2 AC008088.1-201ENST00000580993 280 ntBASIC0.23□□□□□ -2.37
LINC01549A6NIU2 MIR548Y-201ENST00000582739 110 ntBASIC0.23□□□□□ -2.37
LINC01549A6NIU2 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.23□□□□□ -2.37
LINC01549A6NIU2 AC016727.1-205ENST00000605437 569 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms