Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC66A2RUB6 AC008011.1-201ENST00000545989 227 ntBASIC4.24□□□□□ -1.73
CCDC66A2RUB6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC66A2RUB6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC66A2RUB6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC66A2RUB6 AC025627.2-201ENST00000576220 160 ntBASIC4.24□□□□□ -1.73
CCDC66A2RUB6 MIR5690-201ENST00000583739 73 ntBASIC4.24□□□□□ -1.73
CCDC66A2RUB6 MIR3171-201ENST00000584270 74 ntBASIC4.24□□□□□ -1.73
CCDC66A2RUB6 AC114781.5-201ENST00000615297 108 ntBASIC4.24□□□□□ -1.73
CCDC66A2RUB6 MIR7151-201ENST00000617477 60 ntBASIC4.24□□□□□ -1.73
CCDC66A2RUB6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.24□□□□□ -1.73
CCDC66A2RUB6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC66A2RUB6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC66A2RUB6 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
CCDC66A2RUB6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CCDC66A2RUB6 Y_RNA.187-201ENST00000363918 113 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 SNORA7.2-201ENST00000364446 145 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 RNA5SP366-201ENST00000365454 123 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCDC66A2RUB6 RNU6-474P-201ENST00000384243 107 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 RNU6-601P-201ENST00000384540 107 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 MIR559-201ENST00000385188 96 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 AL391417.1-201ENST00000404100 426 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 RPL5P18-201ENST00000406671 891 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 MIR1290-201ENST00000408735 78 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 AC063979.1-201ENST00000415539 377 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 AC017079.2-201ENST00000416102 485 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC66A2RUB6 ATG3P1-201ENST00000419507 911 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC66A2RUB6 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC66A2RUB6 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 FTH1P2-201ENST00000466086 412 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 AC104472.2-201ENST00000469035 601 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC66A2RUB6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC66A2RUB6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC66A2RUB6 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC66A2RUB6 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC66A2RUB6 RNU2-58P-201ENST00000516403 183 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 RN7SKP83-201ENST00000516512 178 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 RNA5SP471-201ENST00000516971 106 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC66A2RUB6 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC66A2RUB6 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC66A2RUB6 MIR548AC-201ENST00000585049 88 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 AC073539.2-201ENST00000597113 165 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 SNRPGP17-201ENST00000603780 214 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 AC098826.3-201ENST00000603823 466 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 CYP2C61P-201ENST00000604072 290 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 AC010378.1-201ENST00000619270 362 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 AL512643.1-201ENST00000635735 524 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC66A2RUB6 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC66A2RUB6 UBE3AP2-201ENST00000429033 2259 ntBASIC4.23□□□□□ -1.73
CCDC66A2RUB6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 MTCO1P12-201ENST00000414273 1543 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 RNU6-1167P-201ENST00000363227 94 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 Y_RNA.146-201ENST00000363549 102 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 RNU6-266P-201ENST00000364225 107 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 RNU6-1303P-201ENST00000364841 107 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 MIR578-201ENST00000384828 96 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AC091390.3-201ENST00000426478 338 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AL359672.1-201ENST00000442302 409 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 Y_RNA.653-201ENST00000459091 95 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AC130509.1-201ENST00000464158 433 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AC010618.1-201ENST00000469924 477 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AC103987.1-201ENST00000473394 348 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 SUMO2P6-201ENST00000505273 288 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 RNU6-143P-201ENST00000516942 93 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 MIR3939-201ENST00000582614 106 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AC002044.1-201ENST00000606707 158 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AP002826.1-201ENST00000608835 315 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AC099778.2-201ENST00000610904 211 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 MIR6716-201ENST00000613413 80 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AC098657.3-201ENST00000620434 263 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 Z99571.1-201ENST00000636677 394 ntBASIC4.22□□□□□ -1.73
CCDC66A2RUB6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC66A2RUB6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.21□□□□□ -1.73
CCDC66A2RUB6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
CCDC66A2RUB6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC66A2RUB6 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC66A2RUB6 RNU6-512P-201ENST00000364438 103 ntBASIC4.21□□□□□ -1.74
CCDC66A2RUB6 RNA5SP189-201ENST00000364920 115 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms