Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RNU2-62P-201ENST00000410868 191 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 AC093106.2-201ENST00000428212 385 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 AL365400.1-201ENST00000431854 640 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 IFNA20P-201ENST00000436840 528 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 GAPDHP27-201ENST00000447427 1020 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU7-59P-201ENST00000459101 61 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU7-180P-201ENST00000459240 63 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU7-66P-201ENST00000459469 62 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU6-329P-201ENST00000459618 107 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 RPL23AP67-201ENST00000465341 474 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 AC092185.1-201ENST00000491371 97 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 AC116562.3-201ENST00000506136 177 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 CCDC34P1-201ENST00000507441 517 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 AC105417.1-201ENST00000514691 285 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 Y_RNA.691-201ENST00000516611 103 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 AC068587.5-201ENST00000528506 175 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 AC109635.4-202ENST00000531666 412 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 OR5B10P-201ENST00000532869 642 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 PSMA3P-201ENST00000555485 635 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 RMST_7.1-201ENST00000621935 268 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 AL160413.1-201ENST00000622780 310 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 AP003355.3-201ENST00000623465 114 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 AC073346.2-201ENST00000624724 2058 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 AC103988.1-201ENST00000566382 2177 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 TAB3P1-202ENST00000452645 1634 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 MFSD8-233ENST00000641482 4860 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.21□□□□□ -1.89
PCDHGB1Q9Y5G3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 U3.12-201ENST00000364498 214 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU6-1029P-201ENST00000384109 107 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 SNORA5A-201ENST00000384111 134 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU6-1181P-201ENST00000384191 106 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 SNORA48.8-201ENST00000391324 134 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AL136372.1-201ENST00000403060 228 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AC114491.1-201ENST00000416095 246 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 HMGN2P31-201ENST00000432430 273 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 ERLEC1P1-201ENST00000433806 578 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AL590639.1-201ENST00000456484 337 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 snoU109.4-201ENST00000458953 143 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 MTND4P17-201ENST00000470444 350 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 RPS27AP1-201ENST00000475545 471 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 RN7SL323P-201ENST00000494712 295 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU1-95P-201ENST00000516357 160 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU1-128P-201ENST00000516704 160 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 RPL7P20-201ENST00000520308 745 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AC022690.1-201ENST00000526681 550 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AP005597.4-201ENST00000526762 229 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 MIR4703-201ENST00000577728 79 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AL669831.4-202ENST00000590817 238 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 CTHRC1P1-201ENST00000605383 469 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AL133255.1-201ENST00000606374 441 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 uc_338.5-201ENST00000611839 155 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 AC011155.2-201ENST00000623202 216 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 MTND4P14-201ENST00000435799 1354 ntBASIC3.21□□□□□ -1.9
PCDHGB1Q9Y5G3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 RNA5SP72-201ENST00000364442 117 ntBASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU5E-6P-201ENST00000365574 115 ntBASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU6-1227P-201ENST00000383981 107 ntBASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU6-641P-201ENST00000384006 107 ntBASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 RNU6-821P-201ENST00000390995 107 ntBASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 HMGB1P18-201ENST00000438801 619 ntBASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 HMGB3P11-201ENST00000440127 604 ntBASIC3.2□□□□□ -1.9
PCDHGB1Q9Y5G3 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms