Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.38□□□□□ -1.87
PKP3Q9Y446 AL121579.1-201ENST00000555129 305 ntBASIC3.38□□□□□ -1.87
PKP3Q9Y446 MIR1254-2-201ENST00000579553 63 ntBASIC3.38□□□□□ -1.87
PKP3Q9Y446 AC098826.3-201ENST00000603823 466 ntBASIC3.38□□□□□ -1.87
PKP3Q9Y446 uc_338.34-201ENST00000617467 174 ntBASIC3.38□□□□□ -1.87
PKP3Q9Y446 AL008636.1-201ENST00000625038 1018 ntBASIC3.38□□□□□ -1.87
PKP3Q9Y446 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKP3Q9Y446 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
PKP3Q9Y446 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PKP3Q9Y446 MIR30E-201ENST00000362104 92 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 RNA5SP197-201ENST00000363357 119 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 Y_RNA.157-201ENST00000363638 102 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 Y_RNA.160-201ENST00000363677 92 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 Y_RNA.231-201ENST00000364358 102 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 RNU6-512P-201ENST00000364438 103 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 Y_RNA.303-201ENST00000364998 94 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 RNU4-66P-201ENST00000365199 138 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKP3Q9Y446 U3.42-201ENST00000408746 214 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP3Q9Y446 RNU2-33P-201ENST00000410344 192 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 RNU6-55P-201ENST00000411092 107 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 RNU6-954P-201ENST00000411355 107 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 AL451062.2-201ENST00000427515 271 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 NDUFB4P6-201ENST00000436819 366 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 SETP5-201ENST00000437270 562 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 MTND3P16-201ENST00000452205 344 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 AC010401.1-201ENST00000463867 348 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 RPS23P3-201ENST00000470993 430 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 RPL7P5-201ENST00000471472 736 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 RN7SL293P-201ENST00000481765 281 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 AL160314.1-201ENST00000490836 438 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 MTCYBP18-201ENST00000501056 747 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP3Q9Y446 MTND4P7-201ENST00000523876 130 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 AL137161.1-201ENST00000532231 390 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.37□□□□□ -1.87
PKP3Q9Y446 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.37□□□□□ -1.87
PKP3Q9Y446 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP3Q9Y446 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP3Q9Y446 AC011611.1-201ENST00000552179 197 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.37□□□□□ -1.87
PKP3Q9Y446 BNIP3P9-201ENST00000603714 553 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 BNIP3P10-201ENST00000605360 577 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 AL390240.1-201ENST00000612950 384 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 AL110115.1-201ENST00000614396 364 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 MIR8058-201ENST00000615737 89 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 AC006504.8-201ENST00000621046 635 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 PLCE1P1-201ENST00000622094 305 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.37□□□□□ -1.87
PKP3Q9Y446 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKP3Q9Y446 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKP3Q9Y446 AC091152.2-201ENST00000591628 2569 ntBASIC3.37□□□□□ -1.87
PKP3Q9Y446 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKP3Q9Y446 MTCO1P12-201ENST00000414273 1543 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKP3Q9Y446 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKP3Q9Y446 RNU4-20P-201ENST00000365601 151 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKP3Q9Y446 RNU6-1197P-201ENST00000391183 107 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 SNORA48.7-201ENST00000391302 135 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKP3Q9Y446 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKP3Q9Y446 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.36□□□□□ -1.87
PKP3Q9Y446 AC138393.2-201ENST00000414742 246 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.36□□□□□ -1.87
PKP3Q9Y446 RPL31P12-201ENST00000422587 358 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.36□□□□□ -1.87
PKP3Q9Y446 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.36□□□□□ -1.87
PKP3Q9Y446 AL592045.1-201ENST00000429867 352 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 ARF4P2-201ENST00000430209 526 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 AL121601.2-201ENST00000438019 707 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 PIGFP3-201ENST00000441918 722 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.36□□□□□ -1.87
PKP3Q9Y446 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.36□□□□□ -1.87
PKP3Q9Y446 RPS4XP2-201ENST00000458402 793 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 RPL21P10-201ENST00000463521 490 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 RPL21P99-201ENST00000480369 423 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 AC091885.1-201ENST00000506658 268 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.36□□□□□ -1.87
PKP3Q9Y446 RNU6-914P-201ENST00000516749 109 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 RNU6-143P-201ENST00000516942 93 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 AC007458.1-201ENST00000542812 373 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.36□□□□□ -1.87
PKP3Q9Y446 MIR4276-201ENST00000584832 70 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 MIR4424-201ENST00000585257 86 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.36□□□□□ -1.87
PKP3Q9Y446 AL161798.1-201ENST00000604630 131 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 MIR15A-201ENST00000607334 83 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 AC019176.2-201ENST00000611579 315 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 AP003122.6-201ENST00000623831 495 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.36□□□□□ -1.87
PKP3Q9Y446 MTND1P37-201ENST00000636562 264 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 AC007256.1-201ENST00000392253 2765 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKP3Q9Y446 AC007785.2-201ENST00000598627 1916 ntBASIC3.36□□□□□ -1.87
PKP3Q9Y446 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKP3Q9Y446 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms