Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.61□□□□□ -2.15
HDGFL3Q9Y3E1 MRPS33P3-201ENST00000513456 322 ntBASIC1.61□□□□□ -2.15
HDGFL3Q9Y3E1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.61□□□□□ -2.15
HDGFL3Q9Y3E1 AC006199.1-201ENST00000548728 219 ntBASIC1.61□□□□□ -2.15
HDGFL3Q9Y3E1 SNRPGP1-201ENST00000553864 222 ntBASIC1.61□□□□□ -2.15
HDGFL3Q9Y3E1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.61□□□□□ -2.15
HDGFL3Q9Y3E1 AC022662.1-201ENST00000580252 331 ntBASIC1.61□□□□□ -2.15
HDGFL3Q9Y3E1 MIR3618-201ENST00000580330 88 ntBASIC1.61□□□□□ -2.15
HDGFL3Q9Y3E1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.61□□□□□ -2.15
HDGFL3Q9Y3E1 AC005776.1-201ENST00000603164 290 ntBASIC1.61□□□□□ -2.15
HDGFL3Q9Y3E1 AC002543.1-201ENST00000299783 1954 ntBASIC1.61□□□□□ -2.15
HDGFL3Q9Y3E1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HDGFL3Q9Y3E1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 AL079343.1-201ENST00000572358 1771 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 RNU6-114P-201ENST00000384704 105 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 MIR9-3-201ENST00000385084 90 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 SNORA40.18-201ENST00000391200 128 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 C1DP1-201ENST00000426049 402 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 AC010153.1-201ENST00000432862 727 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 NANOGP2-201ENST00000435391 727 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 AL121890.1-201ENST00000435457 205 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 PTGES3P1-201ENST00000439531 483 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 CECR9-201ENST00000453421 199 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 MTND4P2-201ENST00000507767 1203 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 RNA5SP112-201ENST00000515937 99 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 SNORA31.23-201ENST00000517219 133 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 OR6C7P-201ENST00000547875 934 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 AC027807.1-201ENST00000559921 996 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 MIR4419B-201ENST00000577260 68 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 AC090897.2-201ENST00000581715 130 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 AC009233.1-201ENST00000616477 371 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 AC068880.4-201ENST00000623082 495 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 AC006927.2-201ENST00000639256 389 ntBASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HDGFL3Q9Y3E1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 RNU6-223P-201ENST00000362830 107 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 RNU5B-4P-201ENST00000363508 111 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 RNU6-234P-201ENST00000365229 104 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 MIR676-201ENST00000390702 67 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 SNORA11.2-201ENST00000408318 127 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 EDDM3CP-201ENST00000415977 425 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 AIMP1P2-201ENST00000425294 312 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 RPL35AP22-201ENST00000436855 335 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 AC003989.2-201ENST00000440224 169 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 AL161651.1-201ENST00000440882 223 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 PMCHL2-203ENST00000457791 237 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 AC104564.1-201ENST00000493028 407 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 RNU6-295P-201ENST00000516901 104 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 AC087897.1-201ENST00000550134 156 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 MIR3912-201ENST00000577566 105 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 MIR4529-201ENST00000578110 78 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 BBIP1P1-201ENST00000602999 279 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 AL138963.2-201ENST00000605137 226 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 AC005858.4-201ENST00000623191 700 ntBASIC1.59□□□□□ -2.15
HDGFL3Q9Y3E1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
HDGFL3Q9Y3E1 AC008555.8-201ENST00000623602 2168 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AL356292.1-201ENST00000283110 373 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 SNORA26.9-201ENST00000391322 122 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 MTCO1P56-201ENST00000401674 224 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AL512604.1-201ENST00000404812 257 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 MIR1261-201ENST00000408659 82 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 RPS24P7-201ENST00000416921 246 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AC020550.1-201ENST00000447385 163 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 TPT1P14-201ENST00000448018 505 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 RPL21P134-201ENST00000453468 483 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 PPP1R2P5-201ENST00000457256 603 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 MTCO1P42-201ENST00000457379 726 ntBASIC1.58□□□□□ -2.16
HDGFL3Q9Y3E1 AC005410.1-202ENST00000460347 485 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms