Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 RNU6-392P-201ENST00000364926 101 ntBASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 RNU6-31P-201ENST00000384388 108 ntBASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 RNU6-1222P-201ENST00000384615 107 ntBASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 MIR325-201ENST00000385260 98 ntBASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 MIR1290-201ENST00000408735 78 ntBASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 RPS27P1-201ENST00000450552 247 ntBASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 MRPS17P3-201ENST00000465453 385 ntBASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 RPS23P4-201ENST00000487908 423 ntBASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 AC098591.2-201ENST00000510152 315 ntBASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 RNA5SP112-201ENST00000515937 99 ntBASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 SNORA31.6-201ENST00000516241 130 ntBASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 NIFKP6-201ENST00000598115 845 ntBASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 BNIP3P4-201ENST00000604946 565 ntBASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 AC055876.5-201ENST00000605667 259 ntBASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 DUSP12P1-201ENST00000612874 516 ntBASIC0.62□□□□□ -2.31
UBE2D4Q9Y2X8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 SNORD114-2-201ENST00000363953 78 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 SNORA25.9-201ENST00000365087 128 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 RNU2-49P-201ENST00000410666 184 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 RPS24P7-201ENST00000416921 246 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 AC007742.1-201ENST00000425789 329 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 ELOCP26-201ENST00000436067 329 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 PRPS1P1-201ENST00000445305 876 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 RPS3AP22-201ENST00000488297 769 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 AC112198.4-201ENST00000515450 351 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 RNU6-1095P-201ENST00000516148 108 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 OR5B19P-201ENST00000531766 928 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 AC005668.1-201ENST00000571142 476 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 AC013244.2-201ENST00000603396 103 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 AC097504.2-201ENST00000608088 454 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 AC008498.1-201ENST00000613012 531 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 STMN1P1-201ENST00000617809 440 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 AL512506.2-201ENST00000624472 458 ntBASIC0.61□□□□□ -2.31
UBE2D4Q9Y2X8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 ICE2P2-201ENST00000483823 2787 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 Y_RNA.4-201ENST00000362333 112 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 MIR146A-201ENST00000385201 99 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 RNU2-63P-201ENST00000410792 194 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 AC009310.1-201ENST00000414414 451 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 MTND4LP10-201ENST00000435146 291 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 RPS15AP5-201ENST00000436276 388 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 AC097499.1-201ENST00000444277 208 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 AL592447.1-201ENST00000447592 540 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 ARPC3P5-201ENST00000448802 534 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 SNORA4.4-201ENST00000515921 135 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 AL356432.3-201ENST00000568952 465 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 RN7SL622P-201ENST00000585292 275 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 AP000403.1-201ENST00000603349 851 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 AC123912.5-201ENST00000605470 343 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 AL355472.4-201ENST00000610233 626 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 AC099842.1-201ENST00000619919 596 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 AL356585.4-201ENST00000623078 1229 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 AC040168.1-201ENST00000623594 991 ntBASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.6□□□□□ -2.31
UBE2D4Q9Y2X8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 RNU6-707P-201ENST00000364647 95 ntBASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 RNU6-98P-201ENST00000384173 107 ntBASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 MIR1303-201ENST00000408625 86 ntBASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 TAAR7P-201ENST00000436141 242 ntBASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 RSU1P2-202ENST00000437884 485 ntBASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 RNU6-902P-201ENST00000517212 91 ntBASIC0.59□□□□□ -2.31
UBE2D4Q9Y2X8 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms