Protein–RNA interactions for Protein: Q9UHX1

PUF60, Poly(U)-binding-splicing factor PUF60, humanhuman

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60Q9UHX1 SNRPFP3-201ENST00000457792 225 ntBASIC4.31□□□□□ -1.72
PUF60Q9UHX1 RN7SL93P-201ENST00000463035 293 ntBASIC4.31□□□□□ -1.72
PUF60Q9UHX1 RPL7P42-201ENST00000481005 679 ntBASIC4.31□□□□□ -1.72
PUF60Q9UHX1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.31□□□□□ -1.72
PUF60Q9UHX1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.31□□□□□ -1.72
PUF60Q9UHX1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.31□□□□□ -1.72
PUF60Q9UHX1 MIR4293-201ENST00000584305 78 ntBASIC4.31□□□□□ -1.72
PUF60Q9UHX1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.31□□□□□ -1.72
PUF60Q9UHX1 AC006116.10-201ENST00000591836 581 ntBASIC4.31□□□□□ -1.72
PUF60Q9UHX1 BDH2P1-201ENST00000602288 736 ntBASIC4.31□□□□□ -1.72
PUF60Q9UHX1 AC069200.1-201ENST00000609511 323 ntBASIC4.31□□□□□ -1.72
PUF60Q9UHX1 AC019176.2-201ENST00000611579 315 ntBASIC4.31□□□□□ -1.72
PUF60Q9UHX1 AP001486.3-201ENST00000615334 372 ntBASIC4.31□□□□□ -1.72
PUF60Q9UHX1 AC084757.4-201ENST00000616350 526 ntBASIC4.31□□□□□ -1.72
PUF60Q9UHX1 AC010205.1-201ENST00000616668 449 ntBASIC4.31□□□□□ -1.72
PUF60Q9UHX1 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PUF60Q9UHX1 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.31□□□□□ -1.72
PUF60Q9UHX1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PUF60Q9UHX1 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PUF60Q9UHX1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PUF60Q9UHX1 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PUF60Q9UHX1 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.31□□□□□ -1.72
PUF60Q9UHX1 AL136164.4-201ENST00000625013 2135 ntBASIC4.31□□□□□ -1.72
PUF60Q9UHX1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.31□□□□□ -1.72
PUF60Q9UHX1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PUF60Q9UHX1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PUF60Q9UHX1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.31□□□□□ -1.72
PUF60Q9UHX1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PUF60Q9UHX1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.3□□□□□ -1.72
PUF60Q9UHX1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.3□□□□□ -1.72
PUF60Q9UHX1 RNA5SP119-201ENST00000362715 117 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 RNU6-61P-201ENST00000365528 109 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 RNU5E-6P-201ENST00000365574 115 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.3□□□□□ -1.72
PUF60Q9UHX1 SNORA22B-201ENST00000383876 138 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 Y_RNA.395-201ENST00000383945 109 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 RNU6-1013P-201ENST00000384180 107 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 Y_RNA.459-201ENST00000384251 102 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PUF60Q9UHX1 RNU6-308P-201ENST00000390957 107 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 MTCYBP4-201ENST00000401524 249 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 MIR1251-201ENST00000408552 70 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 RNU6-370P-201ENST00000411008 104 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.3□□□□□ -1.72
PUF60Q9UHX1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.3□□□□□ -1.72
PUF60Q9UHX1 RPL32P28-201ENST00000443577 397 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 MRPS31P2-201ENST00000451581 518 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.3□□□□□ -1.72
PUF60Q9UHX1 RPL7P43-201ENST00000478876 753 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 PPIAP15-201ENST00000479662 484 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 AC108860.1-201ENST00000484521 383 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 TRBVA-201ENST00000498804 316 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.3□□□□□ -1.72
PUF60Q9UHX1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.3□□□□□ -1.72
PUF60Q9UHX1 MTND4P7-201ENST00000523876 130 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 AP000889.2-201ENST00000532684 490 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.3□□□□□ -1.72
PUF60Q9UHX1 AC244505.7-201ENST00000599675 272 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 AL034351.1-201ENST00000605288 668 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 AC019193.3-201ENST00000609144 554 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 AC025034.2-201ENST00000623264 286 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 AC244517.12-201ENST00000623581 663 ntBASIC4.3□□□□□ -1.72
PUF60Q9UHX1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PUF60Q9UHX1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.3□□□□□ -1.72
PUF60Q9UHX1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PUF60Q9UHX1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PUF60Q9UHX1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PUF60Q9UHX1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PUF60Q9UHX1 RNU6-76P-201ENST00000384060 104 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 Y_RNA.576-201ENST00000384781 102 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 MIR591-201ENST00000385290 95 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 RNU4-65P-201ENST00000410473 140 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 RNA5SP107-201ENST00000411358 122 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 AC113618.1-201ENST00000416747 285 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 ARL5AP1-201ENST00000418991 388 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 PMCHL1-202ENST00000423102 261 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 PPP1R11P2-201ENST00000423543 382 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.29□□□□□ -1.72
PUF60Q9UHX1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.29□□□□□ -1.72
PUF60Q9UHX1 RPL23AP83-201ENST00000434984 473 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.29□□□□□ -1.72
PUF60Q9UHX1 AC005019.1-201ENST00000436455 431 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.29□□□□□ -1.72
PUF60Q9UHX1 AC005094.1-201ENST00000440420 368 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.29□□□□□ -1.72
PUF60Q9UHX1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.29□□□□□ -1.72
PUF60Q9UHX1 Y_RNA.654-201ENST00000497848 106 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 AC135721.1-201ENST00000497954 479 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 AC021146.2-201ENST00000504736 556 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.29□□□□□ -1.72
PUF60Q9UHX1 AC093303.1-201ENST00000514549 295 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PUF60Q9UHX1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.29□□□□□ -1.72
PUF60Q9UHX1 AC106900.2-201ENST00000604994 317 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 Z82243.1-201ENST00000609432 473 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.29□□□□□ -1.72
PUF60Q9UHX1 AC005344.1-201ENST00000613391 459 ntBASIC4.29□□□□□ -1.72
PUF60Q9UHX1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms