Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 ANKRD26P4-201ENST00000455755 950 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 RPS20P20-201ENST00000460498 340 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AC133134.1-201ENST00000466800 359 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AC126182.1-201ENST00000478134 357 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AC010424.1-201ENST00000506336 297 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 CDC42P4-201ENST00000510507 563 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 MTND3P5-201ENST00000512798 333 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AC091544.4-201ENST00000555268 342 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 UBE2L4-201ENST00000587688 464 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AL590229.1-201ENST00000603497 542 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AC013412.1-201ENST00000610687 192 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AL355073.2-201ENST00000612106 557 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AC104237.2-201ENST00000612456 443 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AC093838.1-201ENST00000613014 469 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AC122133.1-201ENST00000613964 233 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AL158801.5-201ENST00000623123 465 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 PCMTD1P7-201ENST00000634506 357 ntBASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLIP2Q9UDT6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CLIP2Q9UDT6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CLIP2Q9UDT6 RNU6-741P-201ENST00000383889 107 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 RPS4XP7-201ENST00000406274 780 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 UBE2V1P10-201ENST00000414685 269 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 AC098592.1-201ENST00000419352 333 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 AC092047.1-201ENST00000424997 240 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 FCF1P1-201ENST00000432690 571 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 RSU1P2-202ENST00000437884 485 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 RPS24P1-201ENST00000438550 371 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 RPL32P28-201ENST00000443577 397 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 BMI1P1-201ENST00000445879 941 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 RPL23AP45-201ENST00000476406 468 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 NRON-201ENST00000517270 370 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 AL512310.1-201ENST00000548639 172 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 AC006362.1-201ENST00000567392 174 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 WISP1-OT1-201ENST00000602893 642 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 AC073648.5-201ENST00000603502 305 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 AC107294.1-201ENST00000609524 467 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 AC245517.5-201ENST00000611529 162 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 AL607023.1-201ENST00000620045 248 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.9□□□□□ -1.95
CLIP2Q9UDT6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 Y_RNA.3-201ENST00000362331 103 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 RNU6-931P-201ENST00000363850 107 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 RNA5SP456-201ENST00000364002 114 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 RNU6-853P-201ENST00000364306 107 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 Y_RNA.359-201ENST00000365498 102 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 RNU6-517P-201ENST00000384362 110 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 SNORA26.8-201ENST00000391306 124 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 AL359511.1-201ENST00000402970 211 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 MTCO3P41-201ENST00000414801 328 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 MTND4P20-201ENST00000424125 869 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 RPL7P37-201ENST00000425095 738 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 C8orf59P1-201ENST00000429930 303 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 AC244035.1-201ENST00000430042 390 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 RPS12P2-201ENST00000439728 269 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 AL714022.1-201ENST00000439897 151 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 BNIP3P2-201ENST00000441221 577 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 AC087588.1-201ENST00000462203 316 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 AC116337.2-201ENST00000477662 156 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 LINC00888-204ENST00000487386 421 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 RPS27P26-201ENST00000494583 239 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 RNU6-840P-201ENST00000517275 65 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 MTCYBP20-201ENST00000524239 1129 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 TRAV28-201ENST00000557548 323 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 AC012414.6-201ENST00000568241 401 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 AC005951.2-201ENST00000576282 495 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 MIR4999-201ENST00000585029 91 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 TPMTP1-201ENST00000592307 737 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 AL137847.3-201ENST00000611521 109 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 TUG1_2.1-201ENST00000614234 87 ntBASIC2.89□□□□□ -1.95
CLIP2Q9UDT6 AL158063.1-201ENST00000615349 536 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms