Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
EHD3Q9NZN3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.64□□□□□ -1.83
EHD3Q9NZN3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
EHD3Q9NZN3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
EHD3Q9NZN3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
EHD3Q9NZN3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
EHD3Q9NZN3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
EHD3Q9NZN3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.63□□□□□ -1.83
EHD3Q9NZN3 MIR369-201ENST00000362155 70 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 Y_RNA.315-201ENST00000365117 102 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 RNU6-692P-201ENST00000384496 107 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 EI24P2-201ENST00000397776 1076 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 HSPE1P8-201ENST00000406997 288 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 AC074085.1-201ENST00000413598 418 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 MTCO2P27-201ENST00000420740 428 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 BRK1P2-201ENST00000442875 223 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 TRBV1-201ENST00000476502 284 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 AP002812.1-201ENST00000495378 474 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 MTND5P5-201ENST00000503764 376 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 VN1R104P-201ENST00000505115 1009 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 AC009901.1-201ENST00000506703 541 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.63□□□□□ -1.83
EHD3Q9NZN3 RN7SKP209-201ENST00000516888 304 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.63□□□□□ -1.83
EHD3Q9NZN3 FAM60BP-201ENST00000578364 658 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 AC138761.3-201ENST00000579993 334 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.63□□□□□ -1.83
EHD3Q9NZN3 ZNF826P-207ENST00000622273 1910 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
EHD3Q9NZN3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
EHD3Q9NZN3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.63□□□□□ -1.83
EHD3Q9NZN3 AL353746.1-201ENST00000566293 6881 ntBASIC3.63□□□□□ -1.83
EHD3Q9NZN3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.63□□□□□ -1.83
EHD3Q9NZN3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 Y_RNA.212-201ENST00000364177 102 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 Y_RNA.399-201ENST00000383955 105 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 RNU6-213P-201ENST00000384051 104 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 MIR607-201ENST00000385241 96 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 RNU6-817P-201ENST00000391083 104 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 MIR450B-201ENST00000401182 78 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 AL139397.2-201ENST00000404529 772 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 PPIAP31-201ENST00000405422 495 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 RPS4XP7-201ENST00000406274 780 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 RN7SKP158-201ENST00000410453 326 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 RNU6-370P-201ENST00000411008 104 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 RPL37P10-201ENST00000412884 288 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 AL160275.3-201ENST00000423876 471 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 RPL7P2-201ENST00000427639 268 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 RNU6-953P-201ENST00000459154 107 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 RNU7-167P-201ENST00000459160 62 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 AC027575.1-201ENST00000481064 460 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 RPS4XP13-201ENST00000483219 789 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 AC096576.1-201ENST00000489014 359 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 AC005741.1-201ENST00000511094 432 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 APOOP3-201ENST00000536787 586 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 SNORD84-203ENST00000584275 78 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 AC023043.2-201ENST00000589678 1026 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 SNRPGP15-201ENST00000600149 222 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 VN1R85P-201ENST00000601587 426 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 AC124303.1-201ENST00000605703 360 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 AL365440.1-201ENST00000436135 2167 ntBASIC3.62□□□□□ -1.83
EHD3Q9NZN3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.62□□□□□ -1.83
EHD3Q9NZN3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 SNORD42.2-201ENST00000365570 69 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 SNORD116-11-201ENST00000383882 92 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 RNU6-474P-201ENST00000384243 107 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 RNU6-434P-201ENST00000384376 107 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 RNY4P36-201ENST00000391116 96 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 RPS12P24-201ENST00000412619 387 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 EI24P1-201ENST00000416584 867 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms