Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 MTCO2P21-201ENST00000419780 677 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 AC008850.1-201ENST00000427546 362 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 MTND1P32-201ENST00000433043 938 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 CR769776.1-201ENST00000441254 787 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 OSTCP8-201ENST00000445117 448 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 CBWD4P-201ENST00000445695 655 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 RPS20P22-201ENST00000473700 357 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 AC105252.1-201ENST00000503089 286 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 AC022447.3-201ENST00000506865 495 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 TTC39CP1-201ENST00000512513 755 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 RNU5A-4P-201ENST00000516588 111 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 HMGN1P28-201ENST00000521340 364 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 AC023538.1-201ENST00000534576 736 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 DUXAP1-201ENST00000556632 463 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 AL161729.4-201ENST00000604650 476 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 AL161423.1-201ENST00000613700 262 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 AC019226.1-201ENST00000625666 515 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 MIR7157-201ENST00000635801 60 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 MTND5P33-201ENST00000571250 1450 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 MTND5P29-201ENST00000458676 1807 ntBASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HOXC10Q9NYD6 AC080128.1-201ENST00000474389 1917 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 SNORD113-6-201ENST00000363345 75 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 SNORA3A-201ENST00000364113 130 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 SNORA4.1-201ENST00000364263 144 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 RNU6-741P-201ENST00000383889 107 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 RNU6-757P-201ENST00000410334 100 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 MTCO1P17-201ENST00000411522 491 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 AC023141.4-201ENST00000412031 328 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 AC013410.2-201ENST00000422627 201 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 HMGB1P9-201ENST00000429856 646 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 Y_RNA.638-201ENST00000459374 113 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 RPS27P21-201ENST00000486977 252 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 AC116337.1-201ENST00000509680 687 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 RNU6-311P-201ENST00000516224 102 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 RNU6-1256P-201ENST00000516539 103 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 TUG1_2.1-201ENST00000614234 87 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 AL031601.2-202ENST00000622650 282 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 PCMTD1P7-201ENST00000634506 357 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 AC093591.3-201ENST00000634516 308 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 AC002543.1-201ENST00000299783 1954 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 OR4G2P-202ENST00000641004 1759 ntBASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HOXC10Q9NYD6 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 RNU6-217P-201ENST00000384164 104 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 MIR513B-201ENST00000385136 84 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 MIR320C1-201ENST00000408566 88 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 SSR1P2-201ENST00000415208 787 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 USP9YP27-201ENST00000418455 438 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 Z82210.1-201ENST00000440037 231 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AP1S2P1-201ENST00000457344 379 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AC072039.1-201ENST00000477611 581 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AL049874.1-201ENST00000489560 388 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 RPL38P4-201ENST00000502376 214 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 SCARNA17.1-201ENST00000516211 143 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 SCARNA17.2-201ENST00000516334 143 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AL391261.3-201ENST00000557194 520 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AL138976.2-201ENST00000563989 694 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AC025811.1-201ENST00000604312 472 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AL450336.1-201ENST00000605180 586 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AC009318.2-201ENST00000610917 651 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AL137847.3-201ENST00000611521 109 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 SCARNA17.4-201ENST00000614296 143 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AC009090.3-201ENST00000616553 565 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AC010378.1-201ENST00000619270 362 ntBASIC2.47□□□□□ -2.01
HOXC10Q9NYD6 AL391262.2-201ENST00000622466 494 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms