Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.24□□□□□ -1.89
LIN7CQ9NUP9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LIN7CQ9NUP9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LIN7CQ9NUP9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.24□□□□□ -1.89
LIN7CQ9NUP9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LIN7CQ9NUP9 AC233263.6-201ENST00000631132 1963 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AC010680.1-201ENST00000590024 3590 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 Y_RNA.72-201ENST00000362894 103 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 Y_RNA.100-201ENST00000363141 102 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 RNU6-266P-201ENST00000364225 107 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 RNA5SP130-201ENST00000364431 114 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 Z98749.2-208ENST00000381646 500 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 EIF4E2P1-201ENST00000393781 255 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AL445189.1-201ENST00000405722 338 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 RPL5P18-201ENST00000406671 891 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 RNA5SP317-201ENST00000410176 116 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 RNA5SP311-201ENST00000411290 116 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AL356095.1-201ENST00000417217 199 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AL513185.2-201ENST00000425543 193 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AL158071.1-201ENST00000430315 461 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AC091390.1-201ENST00000433904 331 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AC117503.1-201ENST00000472241 394 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 RNA5SP315-201ENST00000516340 116 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 RNA5SP312-201ENST00000517068 116 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 SNORA25.17-201ENST00000517184 124 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AC087369.1-201ENST00000520775 996 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AC107953.1-201ENST00000522216 297 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AC091516.1-201ENST00000549191 703 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 MIR3941-201ENST00000582572 103 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AC024220.1-201ENST00000603675 484 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 AL161629.2-201ENST00000615347 275 ntBASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
LIN7CQ9NUP9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 CBX3P1-201ENST00000325243 554 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 Y_RNA.279-201ENST00000364763 95 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 SNORA14A-201ENST00000364773 135 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 Y_RNA.324-201ENST00000365165 102 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 Y_RNA.530-201ENST00000384587 101 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 RNU6-328P-201ENST00000390887 106 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 USP9YP20-201ENST00000419224 558 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 BPY2DP-201ENST00000422208 265 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 AC005300.1-201ENST00000428401 373 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 HMGB1P9-201ENST00000429856 646 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 PMCHL2-203ENST00000457791 237 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 AC128713.1-201ENST00000471495 306 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 AC068587.1-201ENST00000483613 781 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 SNORA19.2-201ENST00000516013 114 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 RN7SKP209-201ENST00000516888 304 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 AC090136.1-201ENST00000520009 240 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 CYCSP27-201ENST00000527643 293 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 AL645944.1-201ENST00000603857 493 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 AC009248.2-201ENST00000619826 254 ntBASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.22□□□□□ -1.89
LIN7CQ9NUP9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LIN7CQ9NUP9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LIN7CQ9NUP9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
LIN7CQ9NUP9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.21□□□□□ -1.9
LIN7CQ9NUP9 SPRR2C-201ENST00000290702 219 ntBASIC3.21□□□□□ -1.9
LIN7CQ9NUP9 RNU6-1252P-201ENST00000363054 104 ntBASIC3.21□□□□□ -1.9
LIN7CQ9NUP9 RNU1-13P-201ENST00000384499 162 ntBASIC3.21□□□□□ -1.9
LIN7CQ9NUP9 PTMAP5-201ENST00000393073 333 ntBASIC3.21□□□□□ -1.9
LIN7CQ9NUP9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LIN7CQ9NUP9 RPL21P65-201ENST00000406094 466 ntBASIC3.21□□□□□ -1.9
LIN7CQ9NUP9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.21□□□□□ -1.9
LIN7CQ9NUP9 RPL35AP12-201ENST00000425362 338 ntBASIC3.21□□□□□ -1.9
LIN7CQ9NUP9 AL691449.1-201ENST00000426570 421 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms