Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRDM9Q9NQV7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 RN7SKP160-201ENST00000363804 340 ntBASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 RNU6-356P-201ENST00000384140 107 ntBASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 AC090877.1-201ENST00000561418 344 ntBASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 AC136624.4-201ENST00000573044 370 ntBASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 MIR3646-201ENST00000578301 84 ntBASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 RN7SL753P-201ENST00000581238 290 ntBASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 AC105254.2-201ENST00000603636 436 ntBASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 AC087783.2-201ENST00000605070 562 ntBASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 AC004467.1-201ENST00000615678 330 ntBASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 AC109583.2-201ENST00000617367 129 ntBASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 AC100757.1-201ENST00000616872 1835 ntBASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.17□□□□□ -1.58
PRDM9Q9NQV7 AL450326.2-201ENST00000421913 1962 ntBASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 MIR487A-201ENST00000385009 80 ntBASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 RNU6-763P-201ENST00000390865 106 ntBASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 BPY2DP-201ENST00000422208 265 ntBASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 RN7SL547P-201ENST00000490793 290 ntBASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 ATP5LP3-201ENST00000514223 304 ntBASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 BX510359.5-201ENST00000515651 304 ntBASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 RNA5SP228-201ENST00000516232 133 ntBASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 RNA5SP76-201ENST00000516277 87 ntBASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 AC021269.2-201ENST00000532318 330 ntBASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 AC007225.2-201ENST00000562529 256 ntBASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 RN7SL356P-201ENST00000582228 248 ntBASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 MTND5P35-201ENST00000557537 1720 ntBASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 AL138820.1-201ENST00000617901 5305 ntBASIC5.16□□□□□ -1.58
PRDM9Q9NQV7 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.15□□□□□ -1.58
PRDM9Q9NQV7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PRDM9Q9NQV7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
PRDM9Q9NQV7 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
PRDM9Q9NQV7 RNU6-178P-201ENST00000384631 104 ntBASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 SNORD37.2-201ENST00000391075 66 ntBASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 AC007919.1-201ENST00000429380 217 ntBASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 AC016632.1-201ENST00000503994 196 ntBASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 SCARNA16.4-201ENST00000516956 187 ntBASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 SCARNA20.4-201ENST00000516969 131 ntBASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 AP001328.1-201ENST00000528550 176 ntBASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 AC023043.3-201ENST00000593113 385 ntBASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 AC073073.2-201ENST00000609827 2578 ntBASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
PRDM9Q9NQV7 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms