Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 AC032011.1-201ENST00000611703 1549 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 AC016588.2-201ENST00000632484 3021 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 RNA5SP175-201ENST00000364275 119 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 Y_RNA.376-201ENST00000365638 108 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 RNU6-76P-201ENST00000384060 104 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 RNU6-1179P-201ENST00000384667 107 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 MIR548I3-201ENST00000408378 149 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 MIR548I1-201ENST00000408810 149 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 RNU6-325P-201ENST00000411132 105 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 RNU4-61P-201ENST00000411243 107 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 CYCSP33-201ENST00000414485 327 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 AL121871.1-201ENST00000443413 436 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 RANP8-201ENST00000444720 713 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 AC073910.1-201ENST00000445047 438 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 RPS3AP46-201ENST00000448352 682 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 RPL23AP24-201ENST00000458203 385 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 AC113155.1-201ENST00000511141 769 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 AC015795.1-201ENST00000513669 327 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 SNORA40.14-201ENST00000516543 86 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 AC079587.1-201ENST00000603846 277 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 AL356218.2-201ENST00000605264 187 ntBASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.86□□□□□ -1.79
SEC61A2Q9H9S3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 MTND5P27-201ENST00000428871 1720 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 RNA5SP502-201ENST00000362694 119 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 RNU6-882P-201ENST00000391025 103 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 AL138885.1-201ENST00000405921 675 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 RBMY1KP-201ENST00000423480 476 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 C4BPAP2-201ENST00000428434 478 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 AL592045.1-201ENST00000429867 352 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 AL359073.1-201ENST00000448036 403 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 RN7SL860P-201ENST00000473738 223 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 HMGN2P13-201ENST00000476476 274 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 MTND1P19-201ENST00000511780 315 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 ACA59.1-201ENST00000515966 143 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 Y_RNA.687-201ENST00000516558 91 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 AC087369.1-201ENST00000520775 996 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 AC007375.1-201ENST00000554513 578 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 RPL23AP97-201ENST00000568955 471 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 AC123912.5-201ENST00000605470 343 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 AC096772.1-201ENST00000609146 564 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 AC011944.2-201ENST00000624440 683 ntBASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SEC61A2Q9H9S3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 MIR331-201ENST00000362302 94 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 RNA5SP509-201ENST00000364577 119 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 Y_RNA.324-201ENST00000365165 102 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 SNORA51.11-201ENST00000384442 131 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 Y_RNA.534-201ENST00000384599 112 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 PHBP16-201ENST00000446318 950 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 snoU13.3-201ENST00000459441 104 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 HMGB1P35-201ENST00000503360 598 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 SUMO2P6-201ENST00000505273 288 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 SNORA40.15-201ENST00000516884 107 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 RNU6-570P-201ENST00000517051 105 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 TRAV32-201ENST00000553993 340 ntBASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.84□□□□□ -1.79
SEC61A2Q9H9S3 AC090517.1-201ENST00000569307 266 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms