Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RNU6-1163P-201ENST00000364516 107 ntBASIC6.76□□□□□ -1.33
RNF39Q9H2S5 MIR633-201ENST00000384821 98 ntBASIC6.76□□□□□ -1.33
RNF39Q9H2S5 MIR1290-201ENST00000408735 78 ntBASIC6.76□□□□□ -1.33
RNF39Q9H2S5 VPS25P1-201ENST00000455691 508 ntBASIC6.76□□□□□ -1.33
RNF39Q9H2S5 RNA5SP434-201ENST00000516647 121 ntBASIC6.76□□□□□ -1.33
RNF39Q9H2S5 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.76□□□□□ -1.33
RNF39Q9H2S5 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF39Q9H2S5 AC024884.1-201ENST00000620583 399 ntBASIC6.76□□□□□ -1.33
RNF39Q9H2S5 AC005086.4-201ENST00000623065 213 ntBASIC6.76□□□□□ -1.33
RNF39Q9H2S5 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF39Q9H2S5 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF39Q9H2S5 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.76□□□□□ -1.33
RNF39Q9H2S5 AC022819.1-201ENST00000563495 3910 ntBASIC6.76□□□□□ -1.33
RNF39Q9H2S5 AC005261.2-201ENST00000593427 4258 ntBASIC6.76□□□□□ -1.33
RNF39Q9H2S5 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF39Q9H2S5 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 AL139811.1-201ENST00000424779 2299 ntBASIC6.75□□□□□ -1.33
RNF39Q9H2S5 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 AC010329.2-201ENST00000595195 2737 ntBASIC6.75□□□□□ -1.33
RNF39Q9H2S5 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 RNU1-134P-201ENST00000362935 165 ntBASIC6.75□□□□□ -1.33
RNF39Q9H2S5 SNORD115-14-201ENST00000363090 81 ntBASIC6.75□□□□□ -1.33
RNF39Q9H2S5 SNORD115-39-201ENST00000363694 82 ntBASIC6.75□□□□□ -1.33
RNF39Q9H2S5 Y_RNA.242-201ENST00000364473 110 ntBASIC6.75□□□□□ -1.33
RNF39Q9H2S5 RNA5SP478-201ENST00000364657 115 ntBASIC6.75□□□□□ -1.33
RNF39Q9H2S5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 AC098847.1-201ENST00000473094 348 ntBASIC6.75□□□□□ -1.33
RNF39Q9H2S5 RN7SKP66-201ENST00000516681 231 ntBASIC6.75□□□□□ -1.33
RNF39Q9H2S5 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 AC005520.4-201ENST00000604337 90 ntBASIC6.75□□□□□ -1.33
RNF39Q9H2S5 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
RNF39Q9H2S5 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 AC022905.1-201ENST00000503430 3048 ntBASIC6.74□□□□□ -1.33
RNF39Q9H2S5 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 AC126323.6-202ENST00000568092 3511 ntBASIC6.74□□□□□ -1.33
RNF39Q9H2S5 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 AL672167.1-203ENST00000641299 2975 ntBASIC6.74□□□□□ -1.33
RNF39Q9H2S5 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 GPS2P1-201ENST00000411761 986 ntBASIC6.74□□□□□ -1.33
RNF39Q9H2S5 AL022718.1-201ENST00000412004 84 ntBASIC6.74□□□□□ -1.33
RNF39Q9H2S5 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 HMGN2P20-201ENST00000437531 273 ntBASIC6.74□□□□□ -1.33
RNF39Q9H2S5 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 RANP2-201ENST00000456833 229 ntBASIC6.74□□□□□ -1.33
RNF39Q9H2S5 AC025458.1-201ENST00000506046 166 ntBASIC6.74□□□□□ -1.33
RNF39Q9H2S5 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 AC098976.1-201ENST00000513014 541 ntBASIC6.74□□□□□ -1.33
RNF39Q9H2S5 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RNF39Q9H2S5 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 NBPF8-201ENST00000583271 5330 ntBASIC6.73□□□□□ -1.33
RNF39Q9H2S5 RNU5F-1-201ENST00000362507 117 ntBASIC6.73□□□□□ -1.33
RNF39Q9H2S5 RNU6-140P-201ENST00000384566 108 ntBASIC6.73□□□□□ -1.33
RNF39Q9H2S5 MIR1236-201ENST00000408340 102 ntBASIC6.73□□□□□ -1.33
RNF39Q9H2S5 RNU7-80P-201ENST00000459562 61 ntBASIC6.73□□□□□ -1.33
RNF39Q9H2S5 HMGN2P9-201ENST00000476875 229 ntBASIC6.73□□□□□ -1.33
RNF39Q9H2S5 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 AC027229.1-201ENST00000583887 253 ntBASIC6.73□□□□□ -1.33
RNF39Q9H2S5 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 UBE2Q2P6-201ENST00000612666 153 ntBASIC6.73□□□□□ -1.33
RNF39Q9H2S5 U2.21-201ENST00000637295 81 ntBASIC6.73□□□□□ -1.33
RNF39Q9H2S5 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF39Q9H2S5 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms