Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 RNU6-1012P-201ENST00000516606 109 ntBASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 AC008033.2-201ENST00000542626 177 ntBASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 RMST_4.1-201ENST00000616886 107 ntBASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 AL022401.1-201ENST00000619498 108 ntBASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 AC007685.1-201ENST00000329806 452 ntBASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 Y_RNA.504-201ENST00000384481 104 ntBASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 AC114755.2-201ENST00000413520 361 ntBASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 AL391219.1-201ENST00000422570 483 ntBASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 AC087650.1-201ENST00000431445 468 ntBASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 AC079354.2-201ENST00000453523 154 ntBASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 U8.22-201ENST00000459141 133 ntBASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 SCARNA10-201ENST00000459255 330 ntBASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 RPL23AP56-201ENST00000460778 453 ntBASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 AC074133.1-201ENST00000515696 183 ntBASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 RNA5SP392-201ENST00000516905 112 ntBASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 AC027288.2-201ENST00000553028 243 ntBASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 Mico1.1-201ENST00000611698 204 ntBASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 SNX18P1Y-201ENST00000616231 511 ntBASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NUCKS1Q9H1E3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NUCKS1Q9H1E3 AL356489.2-201ENST00000566968 3528 ntBASIC5.15□□□□□ -1.58
NUCKS1Q9H1E3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NUCKS1Q9H1E3 AC027290.2-201ENST00000623210 18662 ntBASIC5.15□□□□□ -1.58
NUCKS1Q9H1E3 AC092435.4-201ENST00000623012 4159 ntBASIC5.15□□□□□ -1.58
NUCKS1Q9H1E3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
NUCKS1Q9H1E3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.15□□□□□ -1.58
NUCKS1Q9H1E3 RNU6-1035P-201ENST00000384477 107 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-1168P-201ENST00000390831 104 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-821P-201ENST00000390995 107 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 SNORA12.2-201ENST00000391040 156 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 CYB5AP4-201ENST00000396692 399 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 RNU4-78P-201ENST00000410940 126 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 HMGB1P27-201ENST00000431429 603 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 AC090774.1-201ENST00000435925 246 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 AC112498.1-201ENST00000444401 332 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 AC231760.1-201ENST00000498002 260 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 HIGD1AP3-201ENST00000515857 278 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 AC090281.1-201ENST00000523019 276 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 CASP1P1-201ENST00000526345 212 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 AC021006.3-201ENST00000530771 192 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 ATP5J2P6-201ENST00000565203 266 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 AC011487.3-201ENST00000593607 453 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 AC108706.1-201ENST00000611053 297 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 AC004852.3-201ENST00000614131 326 ntBASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
NUCKS1Q9H1E3 SDAD1P2-201ENST00000441308 2028 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 Y_RNA.405-201ENST00000383979 100 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 Y_RNA.451-201ENST00000384200 100 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 Y_RNA.524-201ENST00000384564 100 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 Y_RNA.561-201ENST00000384694 100 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 Y_RNA.629-201ENST00000411368 105 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 AC009237.10-201ENST00000414112 510 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 COX6B1P1-201ENST00000415962 213 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 AL096701.2-201ENST00000416920 238 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms