Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RNU7-138P-201ENST00000459479 64 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 AC084357.1-201ENST00000473404 255 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 RN7SKP13-201ENST00000515933 244 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 HPRT1P3-201ENST00000539521 576 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 LRRC37A5P-203ENST00000580181 585 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 RNU6-85P-201ENST00000605989 107 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 AL050343.2-201ENST00000607338 280 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 AL110115.1-201ENST00000614396 364 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 ATP5A1P2-202ENST00000616464 443 ntBASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC113Q9H0I3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 RNU6-1297P-201ENST00000384415 104 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 RPS15AP6-201ENST00000420703 385 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 AC007560.1-201ENST00000426912 237 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 AC018644.1-201ENST00000429934 551 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 AC083863.1-201ENST00000438811 231 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 HMGN2P16-201ENST00000456802 261 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 RPS26P15-201ENST00000488067 348 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 AC139453.3-201ENST00000493276 369 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 SNORA25.17-201ENST00000517184 124 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 IGKV2-38-201ENST00000517443 247 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 AC087369.1-201ENST00000520775 996 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 CASP1P1-201ENST00000526345 212 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 FRG2DP-202ENST00000566967 323 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 AC120057.2-201ENST00000571520 271 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 POLR3GP2-201ENST00000588366 668 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 AC005344.1-201ENST00000613391 459 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 FAM157A-202ENST00000615155 405 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 AL355365.1-201ENST00000616480 294 ntBASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC113Q9H0I3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 AC138393.1-203ENST00000327086 343 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 Y_RNA.339-201ENST00000365325 102 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 RN7SKP53-201ENST00000411337 315 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 UBE2D3P2-201ENST00000424409 445 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 HMGB1P9-201ENST00000429856 646 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 RN7SL271P-201ENST00000487601 295 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 SNORA70.14-201ENST00000516205 110 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 RNA5SP179-201ENST00000517284 121 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 AP005639.2-201ENST00000527592 928 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 MIR4644-201ENST00000579929 84 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 OR1M4P-201ENST00000589199 287 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 AL606490.9-201ENST00000603331 271 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 AC091167.4-201ENST00000605079 184 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 AC126177.8-201ENST00000618339 1015 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 AL160413.1-201ENST00000622780 310 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 AC027309.3-201ENST00000623419 351 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 AC018555.1-201ENST00000567548 1980 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 AC005183.1-201ENST00000603687 1979 ntBASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CCDC113Q9H0I3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 ZNF519P1-201ENST00000449011 1626 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 CUL1P1-201ENST00000509510 2425 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 Y_RNA.259-201ENST00000364619 101 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms