Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 MIR6748-201ENST00000610433 71 ntBASIC4.57□□□□□ -1.68
BHLHE41Q9C0J9 Mico1.1-201ENST00000611698 204 ntBASIC4.57□□□□□ -1.68
BHLHE41Q9C0J9 AL022401.1-201ENST00000619498 108 ntBASIC4.57□□□□□ -1.68
BHLHE41Q9C0J9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
BHLHE41Q9C0J9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
BHLHE41Q9C0J9 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.57□□□□□ -1.68
BHLHE41Q9C0J9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.57□□□□□ -1.68
BHLHE41Q9C0J9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
BHLHE41Q9C0J9 AL445487.1-201ENST00000415694 1580 ntBASIC4.57□□□□□ -1.68
BHLHE41Q9C0J9 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.57□□□□□ -1.68
BHLHE41Q9C0J9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 AC083843.3-201ENST00000623679 2186 ntBASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 Y_RNA.16-201ENST00000362421 102 ntBASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 U8.4-201ENST00000363626 134 ntBASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 RNU1-106P-201ENST00000384382 164 ntBASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 SNORD78.2-201ENST00000391076 69 ntBASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 Y_RNA.625-201ENST00000411256 107 ntBASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 TOMM22P6-201ENST00000465035 409 ntBASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 MIR3691-201ENST00000578066 90 ntBASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 AC073657.2-201ENST00000605661 303 ntBASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 AC027309.3-201ENST00000623419 351 ntBASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 U4.7-201ENST00000638126 106 ntBASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 AC099654.2-201ENST00000433031 1980 ntBASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 LINC01109-201ENST00000603837 3081 ntBASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.56□□□□□ -1.68
BHLHE41Q9C0J9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 AL359693.1-201ENST00000614959 2407 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 AC022893.2-201ENST00000564832 3296 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 RN7SKP95-201ENST00000362860 303 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 RNU6-78P-201ENST00000362897 107 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 Y_RNA.269-201ENST00000364685 89 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 Y_RNA.793-201ENST00000411222 111 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 NDUFB4P10-201ENST00000452541 359 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 snoU13.4-201ENST00000458916 104 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 RPL23AP56-201ENST00000460778 453 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 AC140172.1-201ENST00000502928 141 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 RN7SKP66-201ENST00000516681 231 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 SNORA31.18-201ENST00000517043 134 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 AC090617.3-201ENST00000573670 475 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 MIR4646-201ENST00000580775 63 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 SCARNA4-202ENST00000625402 129 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 TLK1P1-201ENST00000456760 2440 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 AC000123.3-201ENST00000624029 4975 ntBASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BHLHE41Q9C0J9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 AC126323.6-202ENST00000568092 3511 ntBASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 AC139713.2-214ENST00000642059 1811 ntBASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 RNU4-9P-201ENST00000364951 139 ntBASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 Y_RNA.581-201ENST00000391017 97 ntBASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 SNORD58.1-201ENST00000391313 66 ntBASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 AL079342.1-201ENST00000401460 267 ntBASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 MIR1298-201ENST00000408783 112 ntBASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 RNU2-20P-201ENST00000410425 191 ntBASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 RPL17P36-201ENST00000420302 549 ntBASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 AC098614.2-201ENST00000426040 255 ntBASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 AL445305.1-201ENST00000432577 575 ntBASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 NUTF2P7-201ENST00000453086 375 ntBASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 AC060766.3-201ENST00000591442 263 ntBASIC4.54□□□□□ -1.68
BHLHE41Q9C0J9 AL049539.1-201ENST00000611964 459 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms