Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 AC011005.2-201ENST00000487324 359 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 RPS26P15-201ENST00000488067 348 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 AC104576.1-201ENST00000524225 88 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 AC008489.1-201ENST00000524271 483 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 BDH2P1-201ENST00000602288 736 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 AC079587.1-201ENST00000603846 277 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 HMGB1P24-202ENST00000615653 685 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 AL138825.1-201ENST00000618587 192 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 MIR8062-201ENST00000621515 85 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 MIR4272-201ENST00000635924 64 ntBASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXP3Q9BZS1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 MTND5P7-201ENST00000413558 1798 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 Y_RNA.210-201ENST00000364161 110 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 Y_RNA.314-201ENST00000365114 102 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 Y_RNA.577-201ENST00000384794 101 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 MIR578-201ENST00000384828 96 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 MIR3074-201ENST00000384885 81 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 HSPE1P8-201ENST00000406997 288 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 RPS15AP10-201ENST00000432472 382 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 RPS24P13-201ENST00000442520 397 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 AC008571.1-201ENST00000467232 300 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 RPL17P19-201ENST00000489069 552 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 AC104164.2-201ENST00000496953 495 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 AC114801.2-201ENST00000503825 781 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 AC105758.1-201ENST00000506038 399 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 MTND3P25-201ENST00000509243 135 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 SNRPGP16-201ENST00000533275 226 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 AC005951.2-201ENST00000576282 495 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 MIR1254-2-201ENST00000579553 63 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 MIR3138-201ENST00000585238 82 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 AL160281.1-201ENST00000605307 311 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 AC005183.1-201ENST00000603687 1979 ntBASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXP3Q9BZS1 ZNF285B-201ENST00000561698 1767 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 RNA5SP515-201ENST00000364570 118 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 SNORD14.1-201ENST00000365609 90 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 RPL21P1-201ENST00000399532 476 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 RNA5SP39-201ENST00000411245 120 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 RNU6-607P-201ENST00000411283 108 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 AC108032.1-201ENST00000416706 207 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 AL356387.2-201ENST00000422272 243 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 BX276092.3-201ENST00000424182 230 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 UBE2D3P2-201ENST00000424409 445 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 RPL7P2-201ENST00000427639 268 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 RPL21P2-201ENST00000440049 481 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 DAP3P1-201ENST00000441522 278 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 AC073910.1-201ENST00000445047 438 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 AC018437.1-201ENST00000492214 406 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 RNU2-53P-201ENST00000516257 147 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 SNORA40.14-201ENST00000516543 86 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 Y_RNA.715-201ENST00000517082 110 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 AC006064.5-201ENST00000541782 248 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 MIR548AC-201ENST00000585049 88 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 AL591516.1-201ENST00000611326 274 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 AC114781.5-201ENST00000615297 108 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 AL353748.2-201ENST00000622148 471 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 AC068254.2-201ENST00000623938 3577 ntBASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
FOXP3Q9BZS1 AC008669.1-201ENST00000565823 2178 ntBASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
FOXP3Q9BZS1 Y_RNA.447-201ENST00000384184 113 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms