Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 AC012360.3-201ENST00000610036 3449 ntBASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 AC010733.2-201ENST00000589496 5702 ntBASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
KRTAP4-4Q9BYR3 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 ZNF658B-201ENST00000602828 3408 ntBASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 AC138915.4-201ENST00000565549 4147 ntBASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
KRTAP4-4Q9BYR3 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 RNY4P19-201ENST00000362530 96 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 RNA5SP389-201ENST00000362610 115 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 RNA5SP226-201ENST00000362653 115 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU6-1167P-201ENST00000363227 94 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 U3.7-201ENST00000363668 216 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 SNORA30B-201ENST00000365319 129 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 FHL1-203ENST00000370676 833 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU6-339P-201ENST00000384310 107 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AL136100.1-201ENST00000407696 330 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 U3.37-201ENST00000408528 213 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AL355862.1-201ENST00000412705 353 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC009237.9-201ENST00000414800 347 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AL356387.2-201ENST00000422272 243 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC000089.1-201ENST00000424559 801 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC073900.1-201ENST00000429766 776 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 RPL36P19-201ENST00000430744 301 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 AC091390.1-201ENST00000433904 331 ntBASIC1.4□□□□□ -2.19
KRTAP4-4Q9BYR3 RPS15AP28-201ENST00000435088 386 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms