Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
SALL3Q9BXA9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.96□□□□□ -1.77
SALL3Q9BXA9 MIR3171-201ENST00000584270 74 ntBASIC3.96□□□□□ -1.77
SALL3Q9BXA9 AL121992.2-201ENST00000606262 256 ntBASIC3.96□□□□□ -1.77
SALL3Q9BXA9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.96□□□□□ -1.77
SALL3Q9BXA9 AC004908.2-201ENST00000609090 574 ntBASIC3.96□□□□□ -1.77
SALL3Q9BXA9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SALL3Q9BXA9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
SALL3Q9BXA9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SALL3Q9BXA9 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SALL3Q9BXA9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SALL3Q9BXA9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.96□□□□□ -1.78
SALL3Q9BXA9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.96□□□□□ -1.78
SALL3Q9BXA9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SALL3Q9BXA9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SALL3Q9BXA9 SNORD56.3-201ENST00000363507 71 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 Y_RNA.259-201ENST00000364619 101 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 RNU6-1013P-201ENST00000384180 107 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 RNU6-1160P-201ENST00000384546 104 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 SNORD37.1-201ENST00000390968 65 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 CST9LP2-201ENST00000437612 320 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 FTH1P1-201ENST00000437933 532 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AL138799.3-201ENST00000438968 350 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 RNU7-59P-201ENST00000459101 61 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AC078817.1-201ENST00000492623 435 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AC106872.2-201ENST00000494303 480 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 COX7A2P2-201ENST00000505291 250 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AC116562.3-201ENST00000506136 177 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 APOOP4-201ENST00000513530 597 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 Y_RNA.665-201ENST00000516177 98 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AC068587.5-201ENST00000528506 175 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 MIR3200-201ENST00000580767 85 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 SNRPGP17-201ENST00000603780 214 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AL022099.1-201ENST00000604551 712 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AC010733.2-201ENST00000589496 5702 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 RNU6-552P-201ENST00000362869 119 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 RNU6-522P-201ENST00000364497 107 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 MT-TR-201ENST00000387439 65 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 RNU6-907P-201ENST00000390924 102 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 Y_RNA.579-201ENST00000390939 94 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 RPL5P18-201ENST00000406671 891 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AL590639.1-201ENST00000456484 337 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 Y_RNA.631-201ENST00000459607 101 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 RPL7P42-201ENST00000481005 679 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AC068305.1-201ENST00000497406 726 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 RNA5SP309-201ENST00000516670 106 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 ELOCP31-201ENST00000540463 467 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AC128657.1-201ENST00000549459 145 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 HIGD1AP1-201ENST00000550979 275 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AC006270.2-201ENST00000578523 652 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 MIR5195-201ENST00000583555 115 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 POLR3GP2-201ENST00000588366 668 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 CYP2C61P-201ENST00000604072 290 ntBASIC3.95□□□□□ -1.78
SALL3Q9BXA9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.95□□□□□ -1.78
SALL3Q9BXA9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SALL3Q9BXA9 SRP72P2-201ENST00000344851 1979 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SALL3Q9BXA9 RNU4-66P-201ENST00000365199 138 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 Y_RNA.339-201ENST00000365325 102 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SALL3Q9BXA9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.94□□□□□ -1.78
SALL3Q9BXA9 RNU6-474P-201ENST00000384243 107 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 RNU6-1297P-201ENST00000384415 104 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 MIR1183-201ENST00000408856 89 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 RNU2-39P-201ENST00000410604 198 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 RNU2-15P-201ENST00000410692 191 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 OR1AA1P-201ENST00000419597 916 ntBASIC3.94□□□□□ -1.78
SALL3Q9BXA9 AC005517.2-201ENST00000424673 553 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms