Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
USB1Q9BQ65 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
USB1Q9BQ65 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
USB1Q9BQ65 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.09□□□□□ -1.59
USB1Q9BQ65 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
USB1Q9BQ65 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.09□□□□□ -1.59
USB1Q9BQ65 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
USB1Q9BQ65 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.09□□□□□ -1.6
USB1Q9BQ65 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.6
USB1Q9BQ65 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
USB1Q9BQ65 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
USB1Q9BQ65 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USB1Q9BQ65 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
USB1Q9BQ65 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
USB1Q9BQ65 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USB1Q9BQ65 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.08□□□□□ -1.6
USB1Q9BQ65 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
USB1Q9BQ65 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
USB1Q9BQ65 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
USB1Q9BQ65 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
USB1Q9BQ65 snoU2_19.4-201ENST00000364329 80 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 RNU6-140P-201ENST00000384566 108 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 RNU6-429P-201ENST00000384582 108 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 RPL11P3-201ENST00000395256 523 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 RNA5SP475-201ENST00000410568 110 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC5.08□□□□□ -1.6
USB1Q9BQ65 RPS20P14-201ENST00000412545 360 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 RPS26P42-201ENST00000413485 326 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 RPL21P66-201ENST00000426566 466 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 AC099670.2-201ENST00000435130 321 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.08□□□□□ -1.6
USB1Q9BQ65 AL391987.1-201ENST00000441025 200 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 IFNWP4-201ENST00000453148 294 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 MTATP6P7-201ENST00000453315 681 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 FRG2FP-204ENST00000453982 852 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 AC016925.1-201ENST00000458303 298 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 RPS23P7-201ENST00000466210 444 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 RNU6-615P-201ENST00000516065 106 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 RN7SKP288-201ENST00000516227 268 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 MIR2117-201ENST00000516780 80 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 AC090281.1-201ENST00000523019 276 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.08□□□□□ -1.6
USB1Q9BQ65 AC107918.3-201ENST00000533272 382 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 AC109810.1-201ENST00000534066 224 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 CYCSP26-201ENST00000534107 320 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 CR383656.8-201ENST00000549046 145 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 AC133555.2-201ENST00000550213 292 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.08□□□□□ -1.6
USB1Q9BQ65 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.08□□□□□ -1.6
USB1Q9BQ65 AC233702.9-201ENST00000581528 203 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.08□□□□□ -1.6
USB1Q9BQ65 AL359198.2-201ENST00000611836 194 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 RNA5SP440-201ENST00000612665 119 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 Y_RNA.802-201ENST00000614892 130 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.08□□□□□ -1.6
USB1Q9BQ65 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USB1Q9BQ65 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
USB1Q9BQ65 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
USB1Q9BQ65 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.08□□□□□ -1.6
USB1Q9BQ65 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USB1Q9BQ65 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
USB1Q9BQ65 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USB1Q9BQ65 AL022311.1-201ENST00000623726 19416 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USB1Q9BQ65 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USB1Q9BQ65 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USB1Q9BQ65 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USB1Q9BQ65 AC092376.2-201ENST00000622621 4116 ntBASIC5.08□□□□□ -1.6
USB1Q9BQ65 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.08□□□□□ -1.6
USB1Q9BQ65 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
USB1Q9BQ65 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
USB1Q9BQ65 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.07□□□□□ -1.6
USB1Q9BQ65 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
USB1Q9BQ65 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USB1Q9BQ65 AL031595.2-201ENST00000624215 19071 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USB1Q9BQ65 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USB1Q9BQ65 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
USB1Q9BQ65 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USB1Q9BQ65 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USB1Q9BQ65 AC092268.1-201ENST00000342691 405 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 AL078599.1-201ENST00000402075 293 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 AL133270.1-201ENST00000402635 279 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.07□□□□□ -1.6
USB1Q9BQ65 FAR2P2-201ENST00000413041 594 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.07□□□□□ -1.6
USB1Q9BQ65 CHEK2P5-201ENST00000423877 246 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 AC078809.1-201ENST00000427601 140 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.07□□□□□ -1.6
USB1Q9BQ65 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.07□□□□□ -1.6
USB1Q9BQ65 RNU7-197P-201ENST00000458836 62 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 AC091179.3-201ENST00000474761 144 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 RN7SKP276-201ENST00000516242 268 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 AC021678.3-201ENST00000517893 476 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.07□□□□□ -1.6
USB1Q9BQ65 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.07□□□□□ -1.6
USB1Q9BQ65 AL049872.1-201ENST00000556323 322 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.07□□□□□ -1.6
USB1Q9BQ65 AL390726.5-202ENST00000564800 256 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 MIR4679-2-201ENST00000578358 77 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms