Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RNU6-890P-201ENST00000384121 107 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 HSPE1P8-201ENST00000406997 288 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 MIR1251-201ENST00000408552 70 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 RNU2-43P-201ENST00000410306 190 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.56□□□□□ -1.84
TIMP4Q99727 CYP4F29P-201ENST00000420685 446 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.56□□□□□ -1.84
TIMP4Q99727 AL669831.1-202ENST00000428504 417 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.56□□□□□ -1.84
TIMP4Q99727 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.56□□□□□ -1.84
TIMP4Q99727 AC007389.2-201ENST00000434630 306 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 USP9YP7-201ENST00000436723 430 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.56□□□□□ -1.84
TIMP4Q99727 AL035666.1-201ENST00000446195 348 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.56□□□□□ -1.84
TIMP4Q99727 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.56□□□□□ -1.84
TIMP4Q99727 USP9YP32-201ENST00000452432 430 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 AC087884.1-201ENST00000469738 328 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.56□□□□□ -1.84
TIMP4Q99727 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.56□□□□□ -1.84
TIMP4Q99727 AC097473.1-201ENST00000508142 408 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.56□□□□□ -1.84
TIMP4Q99727 RNU6-976P-201ENST00000516086 111 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 RNU6-1069P-201ENST00000516612 133 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 RNU6-1016P-201ENST00000516689 94 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 RNU6-677P-201ENST00000516914 101 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 RNU1-54P-201ENST00000517181 120 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 RNU1-45P-201ENST00000517191 141 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.56□□□□□ -1.84
TIMP4Q99727 COX6CP5-201ENST00000527162 228 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 YPEL5P3-201ENST00000547227 352 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.56□□□□□ -1.84
TIMP4Q99727 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.56□□□□□ -1.84
TIMP4Q99727 BNIP3P16-201ENST00000589779 534 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 AC009229.3-201ENST00000608056 282 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 AL732372.2-225ENST00000642124 456 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.56□□□□□ -1.84
TIMP4Q99727 AL137003.2-201ENST00000606924 2538 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
TIMP4Q99727 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
TIMP4Q99727 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TIMP4Q99727 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
TIMP4Q99727 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TIMP4Q99727 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.56□□□□□ -1.84
TIMP4Q99727 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TIMP4Q99727 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.56□□□□□ -1.84
TIMP4Q99727 NCAPGP1-201ENST00000505112 1814 ntBASIC3.56□□□□□ -1.84
TIMP4Q99727 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TIMP4Q99727 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TIMP4Q99727 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TIMP4Q99727 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TIMP4Q99727 AL583834.1-201ENST00000406943 343 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.55□□□□□ -1.84
TIMP4Q99727 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
TIMP4Q99727 RPL7P10-201ENST00000417407 739 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 PPP1R11P2-201ENST00000423543 382 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 MTCYBP10-201ENST00000424905 650 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 AC083863.1-201ENST00000438811 231 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.55□□□□□ -1.84
TIMP4Q99727 AL500522.2-201ENST00000448562 343 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 AP000873.1-201ENST00000463987 400 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 MTATP8P1-201ENST00000467115 207 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 AL135752.1-201ENST00000479477 471 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 PPIAP15-201ENST00000479662 484 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 RPL21P103-201ENST00000479921 488 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 RPL21P129-201ENST00000491732 478 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 RN7SL323P-201ENST00000494712 295 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.55□□□□□ -1.84
TIMP4Q99727 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.55□□□□□ -1.84
TIMP4Q99727 AC116337.1-201ENST00000509680 687 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.55□□□□□ -1.84
TIMP4Q99727 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.55□□□□□ -1.84
TIMP4Q99727 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.55□□□□□ -1.84
TIMP4Q99727 AP003122.3-201ENST00000526316 255 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.55□□□□□ -1.84
TIMP4Q99727 CYCSP30-201ENST00000546447 172 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.55□□□□□ -1.84
TIMP4Q99727 MIR4680-201ENST00000580906 66 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.55□□□□□ -1.84
TIMP4Q99727 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.55□□□□□ -1.84
TIMP4Q99727 AC067852.3-201ENST00000589177 561 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 AC006006.1-201ENST00000603082 144 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 AC011890.2-201ENST00000613393 294 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 uc_338.32-201ENST00000615087 172 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 AC007485.1-201ENST00000616755 206 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 AC098657.3-201ENST00000620434 263 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 AC138305.3-201ENST00000624988 240 ntBASIC3.55□□□□□ -1.84
TIMP4Q99727 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TIMP4Q99727 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.55□□□□□ -1.84
TIMP4Q99727 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.55□□□□□ -1.84
TIMP4Q99727 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TIMP4Q99727 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.55□□□□□ -1.84
TIMP4Q99727 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TIMP4Q99727 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.55□□□□□ -1.84
TIMP4Q99727 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.55□□□□□ -1.84
TIMP4Q99727 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.55□□□□□ -1.84
TIMP4Q99727 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TIMP4Q99727 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TIMP4Q99727 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.54□□□□□ -1.84
TIMP4Q99727 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms