Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIN3AQ96ST3 DDX10P1-201ENST00000448545 1933 ntBASIC3.52□□□□□ -1.85
SIN3AQ96ST3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIN3AQ96ST3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.51□□□□□ -1.85
SIN3AQ96ST3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SIN3AQ96ST3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIN3AQ96ST3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.51□□□□□ -1.85
SIN3AQ96ST3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SIN3AQ96ST3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SIN3AQ96ST3 RNU6-223P-201ENST00000362830 107 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 RNU6-511P-201ENST00000363496 107 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 RNU6-173P-201ENST00000364215 104 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 RN7SKP226-201ENST00000364912 300 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 SNORA23-201ENST00000365128 182 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 RNU5A-6P-201ENST00000384136 116 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 AL031779.1-201ENST00000415663 330 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 AC119618.1-201ENST00000434191 222 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 ARPC3P1-201ENST00000437218 533 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 MTCO3P45-201ENST00000443036 613 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.51□□□□□ -1.85
SIN3AQ96ST3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.51□□□□□ -1.85
SIN3AQ96ST3 RPL36AP51-201ENST00000487216 318 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.51□□□□□ -1.85
SIN3AQ96ST3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SIN3AQ96ST3 AC114797.1-201ENST00000514003 728 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.51□□□□□ -1.85
SIN3AQ96ST3 HMGN1P28-201ENST00000521340 364 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.51□□□□□ -1.85
SIN3AQ96ST3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.51□□□□□ -1.85
SIN3AQ96ST3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.51□□□□□ -1.85
SIN3AQ96ST3 AL391840.1-201ENST00000571144 367 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.51□□□□□ -1.85
SIN3AQ96ST3 AC245014.2-201ENST00000603689 287 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 AC080078.2-201ENST00000603766 501 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 AL022154.1-201ENST00000604698 785 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 AC246785.4-201ENST00000605374 287 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 AL021997.1-201ENST00000605757 193 ntBASIC3.51□□□□□ -1.85
SIN3AQ96ST3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SIN3AQ96ST3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.5□□□□□ -1.85
SIN3AQ96ST3 RNU1-39P-201ENST00000383897 165 ntBASIC3.5□□□□□ -1.85
SIN3AQ96ST3 SNORA36C-201ENST00000384289 132 ntBASIC3.5□□□□□ -1.85
SIN3AQ96ST3 RNU6-278P-201ENST00000390945 109 ntBASIC3.5□□□□□ -1.85
SIN3AQ96ST3 AP000567.1-201ENST00000406413 156 ntBASIC3.5□□□□□ -1.85
SIN3AQ96ST3 Y_RNA.599-201ENST00000410489 109 ntBASIC3.5□□□□□ -1.85
SIN3AQ96ST3 RPL21P24-201ENST00000413752 448 ntBASIC3.5□□□□□ -1.85
SIN3AQ96ST3 PIGFP2-201ENST00000421400 651 ntBASIC3.5□□□□□ -1.85
SIN3AQ96ST3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.5□□□□□ -1.85
SIN3AQ96ST3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.5□□□□□ -1.85
SIN3AQ96ST3 AL513328.1-201ENST00000446460 224 ntBASIC3.5□□□□□ -1.85
SIN3AQ96ST3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.5□□□□□ -1.85
SIN3AQ96ST3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.5□□□□□ -1.85
SIN3AQ96ST3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.5□□□□□ -1.85
SIN3AQ96ST3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.5□□□□□ -1.85
SIN3AQ96ST3 AC008481.1-201ENST00000463278 396 ntBASIC3.5□□□□□ -1.85
SIN3AQ96ST3 VN1R17P-201ENST00000472048 1090 ntBASIC3.5□□□□□ -1.85
SIN3AQ96ST3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.5□□□□□ -1.85
SIN3AQ96ST3 ERHP1-201ENST00000523006 310 ntBASIC3.5□□□□□ -1.85
SIN3AQ96ST3 MTCYBP20-201ENST00000524239 1129 ntBASIC3.5□□□□□ -1.85
SIN3AQ96ST3 AP003122.3-201ENST00000526316 255 ntBASIC3.5□□□□□ -1.85
SIN3AQ96ST3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.5□□□□□ -1.85
SIN3AQ96ST3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.5□□□□□ -1.85
SIN3AQ96ST3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.5□□□□□ -1.85
SIN3AQ96ST3 AC010546.1-201ENST00000569391 485 ntBASIC3.5□□□□□ -1.85
SIN3AQ96ST3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.5□□□□□ -1.85
SIN3AQ96ST3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.5□□□□□ -1.85
SIN3AQ96ST3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SIN3AQ96ST3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.5□□□□□ -1.85
SIN3AQ96ST3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SIN3AQ96ST3 AC007256.1-201ENST00000392253 2765 ntBASIC3.5□□□□□ -1.85
SIN3AQ96ST3 MTND4P5-201ENST00000435821 1374 ntBASIC3.5□□□□□ -1.85
SIN3AQ96ST3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.49□□□□□ -1.85
SIN3AQ96ST3 RNU6-169P-201ENST00000365336 107 ntBASIC3.49□□□□□ -1.85
SIN3AQ96ST3 RNU6-282P-201ENST00000365357 103 ntBASIC3.49□□□□□ -1.85
SIN3AQ96ST3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SIN3AQ96ST3 SNORA20.2-201ENST00000383922 131 ntBASIC3.49□□□□□ -1.85
SIN3AQ96ST3 Y_RNA.516-201ENST00000384541 124 ntBASIC3.49□□□□□ -1.85
SIN3AQ96ST3 RNU2-62P-201ENST00000410868 191 ntBASIC3.49□□□□□ -1.85
SIN3AQ96ST3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.49□□□□□ -1.85
SIN3AQ96ST3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SIN3AQ96ST3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.49□□□□□ -1.85
SIN3AQ96ST3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.49□□□□□ -1.85
SIN3AQ96ST3 MTND1P34-201ENST00000438556 671 ntBASIC3.49□□□□□ -1.85
SIN3AQ96ST3 RPL7P5-201ENST00000471472 736 ntBASIC3.49□□□□□ -1.85
SIN3AQ96ST3 RPS3AP17-201ENST00000472594 777 ntBASIC3.49□□□□□ -1.85
SIN3AQ96ST3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.49□□□□□ -1.85
SIN3AQ96ST3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SIN3AQ96ST3 AC108078.1-201ENST00000508073 725 ntBASIC3.49□□□□□ -1.85
SIN3AQ96ST3 SNORA31.8-201ENST00000516327 108 ntBASIC3.49□□□□□ -1.85
SIN3AQ96ST3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.49□□□□□ -1.85
SIN3AQ96ST3 AC007536.1-201ENST00000533382 349 ntBASIC3.49□□□□□ -1.85
SIN3AQ96ST3 ARL2BPP2-201ENST00000550907 489 ntBASIC3.49□□□□□ -1.85
SIN3AQ96ST3 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.49□□□□□ -1.85
SIN3AQ96ST3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.49□□□□□ -1.85
SIN3AQ96ST3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.49□□□□□ -1.85
SIN3AQ96ST3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.49□□□□□ -1.85
SIN3AQ96ST3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.49□□□□□ -1.85
SIN3AQ96ST3 AC005951.2-201ENST00000576282 495 ntBASIC3.49□□□□□ -1.85
SIN3AQ96ST3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.49□□□□□ -1.85
SIN3AQ96ST3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.49□□□□□ -1.85
SIN3AQ96ST3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms