Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AL589743.7-201ENST00000612637 233 ntBASIC1.31□□□□□ -2.2
HMCN1Q96RW7 AC022106.2-201ENST00000620114 757 ntBASIC1.31□□□□□ -2.2
HMCN1Q96RW7 MIR664A-201ENST00000626086 82 ntBASIC1.31□□□□□ -2.2
HMCN1Q96RW7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
HMCN1Q96RW7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
HMCN1Q96RW7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
HMCN1Q96RW7 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.556-201ENST00000384677 113 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 MIR450A2-201ENST00000385022 100 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.586-201ENST00000391146 98 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 RN7SKP140-201ENST00000411196 284 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AL451136.1-201ENST00000435399 325 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AC090804.1-201ENST00000448870 490 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AL024509.2-201ENST00000493462 493 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AC116553.2-201ENST00000564203 463 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 MIR5588-201ENST00000581890 63 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AC107871.2-201ENST00000612894 502 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AC004656.1-201ENST00000568479 4951 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.424-201ENST00000384063 103 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 SNORD3H-201ENST00000384486 214 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 UBA52P6-201ENST00000399822 382 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AL358176.2-201ENST00000425769 204 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 RPL7AP61-201ENST00000443410 636 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 RANP8-201ENST00000444720 713 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 MRPS31P2-201ENST00000451581 518 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AC087276.1-201ENST00000529659 480 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 HMGB1P6-201ENST00000569046 646 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 SUMO2P14-201ENST00000604488 293 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AC004696.1-201ENST00000614345 607 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AL138820.1-201ENST00000617901 5305 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.170-201ENST00000363746 110 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.201-201ENST00000364052 96 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.316-201ENST00000365118 111 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 RNU6-742P-201ENST00000365289 107 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.442-201ENST00000384131 102 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 RNY4P13-201ENST00000384284 96 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 MIR504-201ENST00000385065 83 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 MRPL50P4-201ENST00000446432 475 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AC025164.1-201ENST00000496249 478 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 RNU6-158P-201ENST00000517104 100 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 SNORA31.20-201ENST00000517111 133 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AC107934.1-201ENST00000522215 217 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AC006064.5-201ENST00000541782 248 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 MIR4712-201ENST00000583750 82 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 AC104996.3-201ENST00000590718 94 ntBASIC1.3□□□□□ -2.2
HMCN1Q96RW7 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
HMCN1Q96RW7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms