Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SNX18Q96RF0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 Y_RNA.635-201ENST00000459041 101 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 SNORA84-201ENST00000459229 133 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 RN7SL132P-201ENST00000478131 296 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 RN7SKP13-201ENST00000515933 244 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 RNU6-927P-201ENST00000516199 100 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 RNU6-256P-201ENST00000516747 97 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 SNORA25.17-201ENST00000517184 124 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 AC023632.4-201ENST00000517783 191 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 RANP9-201ENST00000519957 271 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 AL442663.2-201ENST00000554385 511 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 MIR3921-201ENST00000577308 85 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 AC126177.8-201ENST00000618339 1015 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 AC034229.5-201ENST00000624258 185 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 AL359757.2-201ENST00000624309 274 ntBASIC3.51□□□□□ -1.85
SNX18Q96RF0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SNX18Q96RF0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNX18Q96RF0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
SNX18Q96RF0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SNX18Q96RF0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SNX18Q96RF0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.5□□□□□ -1.85
SNX18Q96RF0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.5□□□□□ -1.85
SNX18Q96RF0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SNX18Q96RF0 RNU6-600P-201ENST00000362524 99 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 RNA5SP167-201ENST00000365461 116 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 RNU6-1297P-201ENST00000384415 104 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 MIR554-201ENST00000384874 96 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 MIR607-201ENST00000385241 96 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AL391417.1-201ENST00000404100 426 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 MTHFD2P2-201ENST00000407725 247 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 MIR548K-201ENST00000408406 116 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX18Q96RF0 RN7SKP202-201ENST00000410439 330 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 RNU6-1304P-201ENST00000411374 106 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AC080125.1-201ENST00000414888 684 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 VN1R36P-201ENST00000414936 291 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 BTF3L4P3-201ENST00000418879 476 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AL160275.3-201ENST00000423876 471 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AL669831.1-202ENST00000428504 417 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 RPS3AP52-201ENST00000435639 297 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.5□□□□□ -1.85
SNX18Q96RF0 GTF2IP13-201ENST00000438487 386 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 RPS29P7-201ENST00000439662 171 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX18Q96RF0 AC107399.1-201ENST00000451226 265 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 RPL21P129-201ENST00000491732 478 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AP002812.1-201ENST00000495378 474 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX18Q96RF0 AC005921.1-201ENST00000510589 286 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX18Q96RF0 RNU2-69P-201ENST00000516061 100 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 RN7SKP83-201ENST00000516512 178 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 RNU6-566P-201ENST00000516790 107 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 RNU1-45P-201ENST00000517191 141 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX18Q96RF0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.5□□□□□ -1.85
SNX18Q96RF0 AP003072.1-201ENST00000531740 145 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AC090115.3-201ENST00000553218 849 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AC090877.1-201ENST00000561418 344 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.5□□□□□ -1.85
SNX18Q96RF0 MIR4790-201ENST00000577799 79 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AC006270.2-201ENST00000578523 652 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AC078795.3-201ENST00000602913 472 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AC005034.5-201ENST00000604219 466 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 MIR92B-201ENST00000607575 96 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.5□□□□□ -1.85
SNX18Q96RF0 AC034102.8-201ENST00000615146 484 ntBASIC3.5□□□□□ -1.85
SNX18Q96RF0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.5□□□□□ -1.85
SNX18Q96RF0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.5□□□□□ -1.85
SNX18Q96RF0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.5□□□□□ -1.85
SNX18Q96RF0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SNX18Q96RF0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
SNX18Q96RF0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNX18Q96RF0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNX18Q96RF0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNX18Q96RF0 SNORA62.3-201ENST00000365110 153 ntBASIC3.49□□□□□ -1.85
SNX18Q96RF0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNX18Q96RF0 RNU6-434P-201ENST00000384376 107 ntBASIC3.49□□□□□ -1.85
SNX18Q96RF0 Y_RNA.579-201ENST00000390939 94 ntBASIC3.49□□□□□ -1.85
SNX18Q96RF0 RPS4XP7-201ENST00000406274 780 ntBASIC3.49□□□□□ -1.85
SNX18Q96RF0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX18Q96RF0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX18Q96RF0 BX842559.1-201ENST00000419615 532 ntBASIC3.49□□□□□ -1.85
SNX18Q96RF0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX18Q96RF0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX18Q96RF0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX18Q96RF0 AL591704.1-201ENST00000432574 275 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms