Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MTATP6P4-201ENST00000427725 675 ntBASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 RPL39P29-201ENST00000447779 157 ntBASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 RPS24P6-201ENST00000452670 400 ntBASIC0.44□□□□□ -2.34
CSMD1Q96PZ7 SNORA51.2-201ENST00000364595 132 ntBASIC0.43□□□□□ -2.34
CSMD1Q96PZ7 RNU6-629P-201ENST00000384061 103 ntBASIC0.43□□□□□ -2.34
CSMD1Q96PZ7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.43□□□□□ -2.34
CSMD1Q96PZ7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CSMD1Q96PZ7 MIR4658-201ENST00000584344 65 ntBASIC0.43□□□□□ -2.34
CSMD1Q96PZ7 MIR101-1-201ENST00000362265 75 ntBASIC0.43□□□□□ -2.34
CSMD1Q96PZ7 AC073464.3-201ENST00000422564 712 ntBASIC0.43□□□□□ -2.34
CSMD1Q96PZ7 RPL31P60-201ENST00000478450 367 ntBASIC0.43□□□□□ -2.34
CSMD1Q96PZ7 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.43□□□□□ -2.34
CSMD1Q96PZ7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.43□□□□□ -2.34
CSMD1Q96PZ7 AC123786.2-201ENST00000603459 275 ntBASIC0.43□□□□□ -2.34
CSMD1Q96PZ7 AC022079.2-201ENST00000619739 566 ntBASIC0.43□□□□□ -2.34
CSMD1Q96PZ7 CCT4P2-201ENST00000233836 1548 ntBASIC0.43□□□□□ -2.34
CSMD1Q96PZ7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 TPT1P8-201ENST00000510120 555 ntBASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 RNA5SP108-201ENST00000605921 117 ntBASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 VPS26BP1-201ENST00000417155 755 ntBASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 RPL23AP95-201ENST00000426806 265 ntBASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 AC093155.1-201ENST00000440164 826 ntBASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 AC027575.1-201ENST00000481064 460 ntBASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 AC009974.1-201ENST00000608881 455 ntBASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 AC130454.1-201ENST00000622948 401 ntBASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 MTCO1P56-201ENST00000401674 224 ntBASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 SNRPEP7-201ENST00000438350 220 ntBASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 AL358794.1-201ENST00000445689 381 ntBASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 MIR5087-201ENST00000635826 76 ntBASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 ZNF519P1-201ENST00000449011 1626 ntBASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.42□□□□□ -2.34
CSMD1Q96PZ7 RNU1-58P-201ENST00000362413 163 ntBASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 MIR627-201ENST00000384979 97 ntBASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 MRPL35P1-201ENST00000404272 572 ntBASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 RSL24D1P8-201ENST00000434442 492 ntBASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 OSBPL9P3-201ENST00000534523 595 ntBASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 MIR548AX-201ENST00000580117 73 ntBASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 RPL30P13-201ENST00000418873 348 ntBASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 AC013268.2-201ENST00000420753 337 ntBASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 MRPL35P3-201ENST00000421557 364 ntBASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 AC093027.1-201ENST00000546698 429 ntBASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 RRN3P3-201ENST00000549207 578 ntBASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 AP000776.1-201ENST00000530032 1663 ntBASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 SNORD114-3-201ENST00000364969 75 ntBASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 Y_RNA.514-201ENST00000384528 112 ntBASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 MTCO3P4-201ENST00000419236 787 ntBASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC0.41□□□□□ -2.34
CSMD1Q96PZ7 RNU6-19P-201ENST00000384718 107 ntBASIC0.4□□□□□ -2.34
CSMD1Q96PZ7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.4□□□□□ -2.34
CSMD1Q96PZ7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.4□□□□□ -2.34
CSMD1Q96PZ7 RPL23AP6-201ENST00000446637 472 ntBASIC0.4□□□□□ -2.34
CSMD1Q96PZ7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.4□□□□□ -2.34
CSMD1Q96PZ7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
CSMD1Q96PZ7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.4□□□□□ -2.34
CSMD1Q96PZ7 AC090953.1-201ENST00000604305 1092 ntBASIC0.4□□□□□ -2.34
CSMD1Q96PZ7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.4□□□□□ -2.35
CSMD1Q96PZ7 SNORA38-201ENST00000363946 132 ntBASIC0.4□□□□□ -2.35
CSMD1Q96PZ7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.4□□□□□ -2.35
CSMD1Q96PZ7 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.4□□□□□ -2.35
CSMD1Q96PZ7 uc_338.9-201ENST00000617424 182 ntBASIC0.4□□□□□ -2.35
CSMD1Q96PZ7 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
CSMD1Q96PZ7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.4□□□□□ -2.35
CSMD1Q96PZ7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
CSMD1Q96PZ7 RNU6-733P-201ENST00000410759 104 ntBASIC0.4□□□□□ -2.35
CSMD1Q96PZ7 AC006461.1-201ENST00000412637 326 ntBASIC0.4□□□□□ -2.35
CSMD1Q96PZ7 AL355802.3-201ENST00000607571 545 ntBASIC0.4□□□□□ -2.35
CSMD1Q96PZ7 AC013470.4-201ENST00000619978 986 ntBASIC0.4□□□□□ -2.35
CSMD1Q96PZ7 SNORD26-201ENST00000384147 75 ntBASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 RABEPKP1-201ENST00000440529 1026 ntBASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 RNU4-57P-201ENST00000515980 135 ntBASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 ERHP1-201ENST00000523006 310 ntBASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 LINC00933-203ENST00000559812 219 ntBASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 AC008751.2-201ENST00000597885 980 ntBASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 AC083865.1-201ENST00000636634 831 ntBASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 MIR147B-201ENST00000390185 80 ntBASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 HMGN2P21-201ENST00000447764 270 ntBASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 EIF4EP5-201ENST00000528228 640 ntBASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 RSL24D1P11-201ENST00000591045 491 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms