Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RPL21P41-201ENST00000459863 264 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 RPL37P6-202ENST00000464216 403 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 AC146944.2-203ENST00000502493 354 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 AC139495.1-202ENST00000513164 354 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 RNU6-397P-201ENST00000516226 104 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 RN7SKP82-201ENST00000516786 223 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 SNORA40.15-201ENST00000516884 107 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 AC023157.2-201ENST00000540596 141 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 RPL23AP97-201ENST00000568955 471 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 SDR42E1P2-201ENST00000614861 481 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 AL138825.1-201ENST00000618587 192 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 U6.104-201ENST00000637979 90 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 AC027290.2-201ENST00000623210 18662 ntBASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
SYNGAP1Q96PV0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 PABPC1P7-201ENST00000413177 1513 ntBASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 RPL21P1-201ENST00000399532 476 ntBASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 RNU2-38P-201ENST00000410856 79 ntBASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 RN7SKP167-201ENST00000411047 285 ntBASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 MTND5P15-201ENST00000434246 349 ntBASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 AC006600.1-201ENST00000572529 153 ntBASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 MIR5188-201ENST00000583467 113 ntBASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 AC012669.1-201ENST00000603209 283 ntBASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 MIR15A-201ENST00000607334 83 ntBASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 MIR6130-201ENST00000619419 109 ntBASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 SNORD39.4-201ENST00000620099 78 ntBASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 MIR4272-201ENST00000635924 64 ntBASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 USP8P1-201ENST00000494673 3183 ntBASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.85□□□□□ -1.63
SYNGAP1Q96PV0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 OR56A5-201ENST00000340110 738 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 Y_RNA.60-201ENST00000362831 98 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 Y_RNA.64-201ENST00000362845 102 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 RNU6-472P-201ENST00000384299 107 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 Y_RNA.483-201ENST00000384380 101 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 SNORA51.11-201ENST00000384442 131 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 MIR218-2-201ENST00000385006 110 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 MT-TW-201ENST00000387382 68 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 RPL21P65-201ENST00000406094 466 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 AL121871.1-201ENST00000443413 436 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 AC008264.1-201ENST00000447612 367 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 SNORD127-201ENST00000458892 86 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 RNA5SP246-201ENST00000458909 119 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 RPL31P60-201ENST00000478450 367 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 IGKV2D-23-201ENST00000518179 286 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 AC022790.1-201ENST00000522872 204 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 ERHP1-201ENST00000523006 310 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 AC100770.1-201ENST00000532310 322 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 AC107918.3-201ENST00000533272 382 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 AC053481.4-201ENST00000583164 216 ntBASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.63
SYNGAP1Q96PV0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.84□□□□□ -1.64
SYNGAP1Q96PV0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.84□□□□□ -1.64
SYNGAP1Q96PV0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SYNGAP1Q96PV0 MTND5P27-201ENST00000428871 1720 ntBASIC4.84□□□□□ -1.64
SYNGAP1Q96PV0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.84□□□□□ -1.64
SYNGAP1Q96PV0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms